Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HIST2H3AQ71DI3 AC112907.3-201ENST00000577781 2400 ntBASIC17.59■□□□□ 0.41
HIST2H3AQ71DI3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.59■□□□□ 0.41
HIST2H3AQ71DI3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HIST2H3AQ71DI3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
HIST2H3AQ71DI3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HIST2H3AQ71DI3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HIST2H3AQ71DI3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.59■□□□□ 0.41
HIST2H3AQ71DI3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
HIST2H3AQ71DI3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
HIST2H3AQ71DI3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HIST2H3AQ71DI3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
HIST2H3AQ71DI3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
HIST2H3AQ71DI3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HIST2H3AQ71DI3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
HIST2H3AQ71DI3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HIST2H3AQ71DI3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.58■□□□□ 0.41
HIST2H3AQ71DI3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HIST2H3AQ71DI3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.58■□□□□ 0.41
HIST2H3AQ71DI3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HIST2H3AQ71DI3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HIST2H3AQ71DI3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
HIST2H3AQ71DI3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HIST2H3AQ71DI3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HIST2H3AQ71DI3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.58■□□□□ 0.4
HIST2H3AQ71DI3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HIST2H3AQ71DI3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.58■□□□□ 0.4
HIST2H3AQ71DI3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HIST2H3AQ71DI3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
HIST2H3AQ71DI3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HIST2H3AQ71DI3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
HIST2H3AQ71DI3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
HIST2H3AQ71DI3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.57■□□□□ 0.4
HIST2H3AQ71DI3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIST2H3AQ71DI3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HIST2H3AQ71DI3 KRT17P1-201ENST00000399211 1546 ntBASIC17.57■□□□□ 0.4
HIST2H3AQ71DI3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
HIST2H3AQ71DI3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.57■□□□□ 0.4
HIST2H3AQ71DI3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIST2H3AQ71DI3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIST2H3AQ71DI3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIST2H3AQ71DI3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
HIST2H3AQ71DI3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.57■□□□□ 0.4
HIST2H3AQ71DI3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIST2H3AQ71DI3 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.57■□□□□ 0.4
HIST2H3AQ71DI3 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.57■□□□□ 0.4
HIST2H3AQ71DI3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIST2H3AQ71DI3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIST2H3AQ71DI3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HIST2H3AQ71DI3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HIST2H3AQ71DI3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIST2H3AQ71DI3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIST2H3AQ71DI3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
HIST2H3AQ71DI3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HIST2H3AQ71DI3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.57■□□□□ 0.4
HIST2H3AQ71DI3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
HIST2H3AQ71DI3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.57■□□□□ 0.4
HIST2H3AQ71DI3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
HIST2H3AQ71DI3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HIST2H3AQ71DI3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
HIST2H3AQ71DI3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HIST2H3AQ71DI3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.56■□□□□ 0.4
HIST2H3AQ71DI3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIST2H3AQ71DI3 KRT8P17-201ENST00000453110 1448 ntBASIC17.56■□□□□ 0.4
HIST2H3AQ71DI3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIST2H3AQ71DI3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIST2H3AQ71DI3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIST2H3AQ71DI3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIST2H3AQ71DI3 CROCCP5-201ENST00000436658 830 ntBASIC17.56■□□□□ 0.4
HIST2H3AQ71DI3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
HIST2H3AQ71DI3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.56■□□□□ 0.4
HIST2H3AQ71DI3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIST2H3AQ71DI3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HIST2H3AQ71DI3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIST2H3AQ71DI3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HIST2H3AQ71DI3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIST2H3AQ71DI3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIST2H3AQ71DI3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIST2H3AQ71DI3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIST2H3AQ71DI3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
HIST2H3AQ71DI3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIST2H3AQ71DI3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.55■□□□□ 0.4
HIST2H3AQ71DI3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HIST2H3AQ71DI3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.55■□□□□ 0.4
HIST2H3AQ71DI3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HIST2H3AQ71DI3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
HIST2H3AQ71DI3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HIST2H3AQ71DI3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.55■□□□□ 0.4
HIST2H3AQ71DI3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
HIST2H3AQ71DI3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.55■□□□□ 0.4
HIST2H3AQ71DI3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.55■□□□□ 0.4
HIST2H3AQ71DI3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST2H3AQ71DI3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST2H3AQ71DI3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HIST2H3AQ71DI3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST2H3AQ71DI3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HIST2H3AQ71DI3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.55■□□□□ 0.4
HIST2H3AQ71DI3 AF201337.1-201ENST00000520239 748 ntBASIC17.55■□□□□ 0.4
HIST2H3AQ71DI3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.55■□□□□ 0.4
HIST2H3AQ71DI3 C2orf69P4-201ENST00000565394 541 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms