Protein–RNA interactions for Protein: Q12060

HFI1, Transcriptional coactivator HFI1/ADA1, yeastyeast

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HFI1Q12060 MDS3YGL197W 4464 nt1.6□□□□□ -2.15
HFI1Q12060 SXM1YDR395W 2835 nt1.59□□□□□ -2.15
HFI1Q12060 YDR354C-AYDR354C-A 144 nt1.59□□□□□ -2.15
HFI1Q12060 AZF1YOR113W 2745 nt1.58□□□□□ -2.16
HFI1Q12060 YCS4YLR272C 3531 nt1.58□□□□□ -2.16
HFI1Q12060 STO1YMR125W 2586 nt1.58□□□□□ -2.16
HFI1Q12060 YGR130CYGR130C 2451 nt1.58□□□□□ -2.16
HFI1Q12060 SET3YKR029C 2256 nt1.57□□□□□ -2.16
HFI1Q12060 YOR345CYOR345C 351 nt1.57□□□□□ -2.16
HFI1Q12060 SWI4YER111C 3282 nt1.57□□□□□ -2.16
HFI1Q12060 YBR221W-AYBR221W-A 105 nt1.56□□□□□ -2.16
HFI1Q12060 EST2YLR318W 2655 nt1.55□□□□□ -2.16
HFI1Q12060 YNL097C-BYNL097C-B 123 nt1.55□□□□□ -2.16
HFI1Q12060 YNL198CYNL198C 303 nt1.55□□□□□ -2.16
HFI1Q12060 APL1YJR005W 2103 nt1.55□□□□□ -2.16
HFI1Q12060 YJL026C-AYJL026C-A 222 nt1.53□□□□□ -2.16
HFI1Q12060 NUP188YML103C 4968 nt1.53□□□□□ -2.16
HFI1Q12060 IML1YJR138W 4755 nt1.53□□□□□ -2.16
HFI1Q12060 WAR1YML076C 2835 nt1.53□□□□□ -2.17
HFI1Q12060 APL3YBL037W 3078 nt1.52□□□□□ -2.17
HFI1Q12060 NUP145YGL092W 3954 nt1.51□□□□□ -2.17
HFI1Q12060 Q0032Q0032 291 nt1.51□□□□□ -2.17
HFI1Q12060 PAA1YDR071C 576 nt1.51□□□□□ -2.17
HFI1Q12060 YJL182CYJL182C 318 nt1.51□□□□□ -2.17
HFI1Q12060 YBR200W-AYBR200W-A 165 nt1.51□□□□□ -2.17
HFI1Q12060 YNL211CYNL211C 261 nt1.5□□□□□ -2.17
HFI1Q12060 EAF1YDR359C 2949 nt1.5□□□□□ -2.17
HFI1Q12060 RSM22YKL155C 1887 nt1.5□□□□□ -2.17
HFI1Q12060 CCH1YGR217W 6120 nt1.49□□□□□ -2.17
HFI1Q12060 YLL020CYLL020C 306 nt1.49□□□□□ -2.17
HFI1Q12060 YAL067W-AYAL067W-A 228 nt1.49□□□□□ -2.17
HFI1Q12060 YLR466C-BYLR466C-B 117 nt1.49□□□□□ -2.17
HFI1Q12060 TRM732YMR259C 4263 nt1.48□□□□□ -2.17
HFI1Q12060 tH(GUG)E1tH(GUG)E1 72 nt1.48□□□□□ -2.17
HFI1Q12060 tH(GUG)E2tH(GUG)E2 72 nt1.48□□□□□ -2.17
HFI1Q12060 tH(GUG)G1tH(GUG)G1 72 nt1.48□□□□□ -2.17
HFI1Q12060 tH(GUG)G2tH(GUG)G2 72 nt1.48□□□□□ -2.17
HFI1Q12060 tH(GUG)HtH(GUG)H 72 nt1.48□□□□□ -2.17
HFI1Q12060 tH(GUG)KtH(GUG)K 72 nt1.48□□□□□ -2.17
HFI1Q12060 tH(GUG)MtH(GUG)M 72 nt1.48□□□□□ -2.17
HFI1Q12060 YGL007C-AYGL007C-A 87 nt1.48□□□□□ -2.17
HFI1Q12060 YGR151CYGR151C 336 nt1.48□□□□□ -2.17
HFI1Q12060 YOR225WYOR225W 330 nt1.48□□□□□ -2.17
HFI1Q12060 snR52snR52 92 nt1.48□□□□□ -2.17
HFI1Q12060 GEA2YEL022W 4380 nt1.47□□□□□ -2.17
HFI1Q12060 RPS30BYOR182C 192 nt1.47□□□□□ -2.17
HFI1Q12060 RPL33BYOR234C 324 nt1.47□□□□□ -2.17
HFI1Q12060 TTI1YKL033W 3117 nt1.46□□□□□ -2.17
HFI1Q12060 POL5YEL055C 3069 nt1.46□□□□□ -2.18
HFI1Q12060 YJL150WYJL150W 303 nt1.46□□□□□ -2.18
HFI1Q12060 snR46snR46 197 nt1.46□□□□□ -2.18
HFI1Q12060 STF2YGR008C 255 nt1.45□□□□□ -2.18
HFI1Q12060 tQ(UUG)E2tQ(UUG)E2 72 nt1.45□□□□□ -2.18
HFI1Q12060 CMC4YMR194C-B 222 nt1.45□□□□□ -2.18
HFI1Q12060 PIK1YNL267W 3201 nt1.44□□□□□ -2.18
HFI1Q12060 YLR342W-AYLR342W-A 174 nt1.44□□□□□ -2.18
HFI1Q12060 MSN5YDR335W 3675 nt1.44□□□□□ -2.18
HFI1Q12060 SPC110YDR356W 2835 nt1.44□□□□□ -2.18
HFI1Q12060 HUG1YML058W-A 207 nt1.43□□□□□ -2.18
HFI1Q12060 NOP9YJL010C 2001 nt1.43□□□□□ -2.18
HFI1Q12060 COY1YKL179C 2040 nt1.43□□□□□ -2.18
HFI1Q12060 SEC3YER008C 4011 nt1.42□□□□□ -2.18
HFI1Q12060 COX12YLR038C 252 nt1.42□□□□□ -2.18
HFI1Q12060 HAL9YOL089C 3093 nt1.41□□□□□ -2.18
HFI1Q12060 YCR038W-AYCR038W-A 126 nt1.41□□□□□ -2.18
HFI1Q12060 YIL134C-AYIL134C-A 204 nt1.41□□□□□ -2.18
HFI1Q12060 YPL044CYPL044C 549 nt1.41□□□□□ -2.18
HFI1Q12060 PRP39YML046W 1890 nt1.39□□□□□ -2.19
HFI1Q12060 FYV8YGR196C 2454 nt1.39□□□□□ -2.19
HFI1Q12060 YEL073CYEL073C 324 nt1.39□□□□□ -2.19
HFI1Q12060 tV(UAC)BtV(UAC)B 74 nt1.39□□□□□ -2.19
HFI1Q12060 tV(UAC)DtV(UAC)D 74 nt1.39□□□□□ -2.19
HFI1Q12060 PET127YOR017W 2403 nt1.39□□□□□ -2.19
HFI1Q12060 CDC25YLR310C 4770 nt1.39□□□□□ -2.19
HFI1Q12060 STB6YKL072W 2301 nt1.38□□□□□ -2.19
HFI1Q12060 YGL123C-AYGL123C-A 231 nt1.38□□□□□ -2.19
HFI1Q12060 RPL26BYGR034W 384 nt1.38□□□□□ -2.19
HFI1Q12060 PMP1YCR024C-A 123 nt1.37□□□□□ -2.19
HFI1Q12060 YKL100W-AYKL100W-A 90 nt1.37□□□□□ -2.19
HFI1Q12060 ROM2YLR371W 4071 nt1.37□□□□□ -2.19
HFI1Q12060 CDC39YCR093W 6327 nt1.37□□□□□ -2.19
HFI1Q12060 TRS65YGR166W 1683 nt1.36□□□□□ -2.19
HFI1Q12060 NUP157YER105C 4176 nt1.36□□□□□ -2.19
HFI1Q12060 YIL002W-AYIL002W-A 210 nt1.36□□□□□ -2.19
HFI1Q12060 CLU1YMR012W 3834 nt1.36□□□□□ -2.19
HFI1Q12060 SEC21YNL287W 2808 nt1.36□□□□□ -2.19
HFI1Q12060 YNL338WYNL338W 159 nt1.34□□□□□ -2.19
HFI1Q12060 COX5BYIL111W 456 nt1.33□□□□□ -2.2
HFI1Q12060 YLR282CYLR282C 342 nt1.33□□□□□ -2.2
HFI1Q12060 YLR294CYLR294C 330 nt1.33□□□□□ -2.2
HFI1Q12060 HKR1YDR420W 5409 nt1.32□□□□□ -2.2
HFI1Q12060 YFR012W-AYFR012W-A 87 nt1.32□□□□□ -2.2
HFI1Q12060 YOR161W-AYOR161W-A 81 nt1.32□□□□□ -2.2
HFI1Q12060 SIP4YJL089W 2490 nt1.32□□□□□ -2.2
HFI1Q12060 YER053C-AYER053C-A 114 nt1.31□□□□□ -2.2
HFI1Q12060 YML002WYML002W 2214 nt1.3□□□□□ -2.2
HFI1Q12060 snR190snR190 190 nt1.3□□□□□ -2.2
HFI1Q12060 UTP8YGR128C 2142 nt1.3□□□□□ -2.2
HFI1Q12060 YOR381W-AYOR381W-A 168 nt1.29□□□□□ -2.2
HFI1Q12060 UBP3YER151C 2739 nt1.29□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 8 ms