Protein–RNA interactions for Protein: Q06629

HDA2, HDA1 complex subunit 2, yeastyeast

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA2Q06629 YGR109W-BYGR109W-B 4644 nt2.21□□□□□ -2.06
HDA2Q06629 CSF1YLR087C 8877 nt2.21□□□□□ -2.06
HDA2Q06629 LHS1YKL073W 2646 nt2.21□□□□□ -2.06
HDA2Q06629 TOF1YNL273W 3717 nt2.21□□□□□ -2.06
HDA2Q06629 UBP15YMR304W 3693 nt2.21□□□□□ -2.06
HDA2Q06629 SAP185YJL098W 3177 nt2.2□□□□□ -2.06
HDA2Q06629 KOG1YHR186C 4674 nt2.2□□□□□ -2.06
HDA2Q06629 HIR3YJR140C 4947 nt2.2□□□□□ -2.06
HDA2Q06629 PDR11YIL013C 4236 nt2.2□□□□□ -2.06
HDA2Q06629 ADR1YDR216W 3972 nt2.2□□□□□ -2.06
HDA2Q06629 DNF1YER166W 4716 nt2.2□□□□□ -2.06
HDA2Q06629 SVL3YPL032C 2478 nt2.19□□□□□ -2.06
HDA2Q06629 UTP8YGR128C 2142 nt2.19□□□□□ -2.06
HDA2Q06629 YJL026C-AYJL026C-A 222 nt2.19□□□□□ -2.06
HDA2Q06629 YNL266WYNL266W 420 nt2.19□□□□□ -2.06
HDA2Q06629 SEC16YPL085W 6588 nt2.19□□□□□ -2.06
HDA2Q06629 SCD5YOR329C 2619 nt2.18□□□□□ -2.06
HDA2Q06629 UTP21YLR409C 2820 nt2.18□□□□□ -2.06
HDA2Q06629 GCN2YDR283C 4980 nt2.18□□□□□ -2.06
HDA2Q06629 TTI1YKL033W 3117 nt2.17□□□□□ -2.06
HDA2Q06629 APL1YJR005W 2103 nt2.17□□□□□ -2.06
HDA2Q06629 SIR4YDR227W 4077 nt2.17□□□□□ -2.06
HDA2Q06629 MSH6YDR097C 3729 nt2.17□□□□□ -2.06
HDA2Q06629 BNI1YNL271C 5862 nt2.16□□□□□ -2.06
HDA2Q06629 MSB1YOR188W 3414 nt2.16□□□□□ -2.06
HDA2Q06629 MYO4YAL029C 4416 nt2.16□□□□□ -2.06
HDA2Q06629 YBL039C-AYBL039C-A 84 nt2.15□□□□□ -2.07
HDA2Q06629 SPO24YPR036W-A 204 nt2.15□□□□□ -2.07
HDA2Q06629 TRM3YDL112W 4311 nt2.14□□□□□ -2.07
HDA2Q06629 YBL071C-BYBL071C-B 99 nt2.14□□□□□ -2.07
HDA2Q06629 YOL098CYOL098C 3114 nt2.13□□□□□ -2.07
HDA2Q06629 YBR072C-AYBR072C-A 162 nt2.13□□□□□ -2.07
HDA2Q06629 STH1YIL126W 4080 nt2.12□□□□□ -2.07
HDA2Q06629 YHR180W-AYHR180W-A 183 nt2.12□□□□□ -2.07
HDA2Q06629 NUP170YBL079W 4509 nt2.12□□□□□ -2.07
HDA2Q06629 YDL206WYDL206W 2289 nt2.12□□□□□ -2.07
HDA2Q06629 TOR2YKL203C 7425 nt2.12□□□□□ -2.07
HDA2Q06629 RGA1YOR127W 3024 nt2.11□□□□□ -2.07
HDA2Q06629 INO80YGL150C 4470 nt2.1□□□□□ -2.07
HDA2Q06629 YJR039WYJR039W 3366 nt2.1□□□□□ -2.07
HDA2Q06629 NUT1YGL151W 3399 nt2.09□□□□□ -2.07
HDA2Q06629 tM(CAU)Q2tM(CAU)Q2 78 nt2.09□□□□□ -2.07
HDA2Q06629 EMC5YIL027C 426 nt2.09□□□□□ -2.07
HDA2Q06629 USO1YDL058W 5373 nt2.09□□□□□ -2.08
HDA2Q06629 YMR045CYMR045C 5268 nt2.08□□□□□ -2.08
HDA2Q06629 COG6YNL041C 2520 nt2.08□□□□□ -2.08
HDA2Q06629 RAD50YNL250W 3939 nt2.07□□□□□ -2.08
HDA2Q06629 BFR2YDR299W 1605 nt2.07□□□□□ -2.08
HDA2Q06629 TAH1YCR060W 336 nt2.07□□□□□ -2.08
HDA2Q06629 YLL020CYLL020C 306 nt2.07□□□□□ -2.08
HDA2Q06629 YOR161W-AYOR161W-A 81 nt2.07□□□□□ -2.08
HDA2Q06629 ATG9YDL149W 2994 nt2.07□□□□□ -2.08
HDA2Q06629 snR53snR53 91 nt2.06□□□□□ -2.08
HDA2Q06629 MMS4YBR098W 2076 nt2.05□□□□□ -2.08
HDA2Q06629 YER172C-AYER172C-A 381 nt2.05□□□□□ -2.08
HDA2Q06629 YGL123C-AYGL123C-A 231 nt2.05□□□□□ -2.08
HDA2Q06629 ALY2YJL084C 3141 nt2.04□□□□□ -2.08
HDA2Q06629 MGA2YIR033W 3342 nt2.04□□□□□ -2.08
HDA2Q06629 KIP1YBL063W 3336 nt2.04□□□□□ -2.08
HDA2Q06629 YDR210WYDR210W 228 nt2.04□□□□□ -2.08
HDA2Q06629 BIR1YJR089W 2865 nt2.04□□□□□ -2.08
HDA2Q06629 PAN2YGL094C 3348 nt2.04□□□□□ -2.08
HDA2Q06629 FYV10YIL097W 1551 nt2.03□□□□□ -2.08
HDA2Q06629 YGR240C-AYGR240C-A 201 nt2.03□□□□□ -2.08
HDA2Q06629 YJL127W-AYJL127W-A 117 nt2.03□□□□□ -2.08
HDA2Q06629 RSM22YKL155C 1887 nt2.03□□□□□ -2.09
HDA2Q06629 KAP120YPL125W 3099 nt2.02□□□□□ -2.09
HDA2Q06629 YLR232WYLR232W 348 nt2.02□□□□□ -2.09
HDA2Q06629 YOL164W-AYOL164W-A 183 nt2.02□□□□□ -2.09
HDA2Q06629 UFD2YDL190C 2886 nt2.01□□□□□ -2.09
HDA2Q06629 TFC3YAL001C 3483 nt2.01□□□□□ -2.09
HDA2Q06629 COX5BYIL111W 456 nt2.01□□□□□ -2.09
HDA2Q06629 UFD4YKL010C 4452 nt2.01□□□□□ -2.09
HDA2Q06629 SMC1YFL008W 3678 nt2.01□□□□□ -2.09
HDA2Q06629 YKL100W-AYKL100W-A 90 nt2□□□□□ -2.09
HDA2Q06629 YBL100W-CYBL100W-C 120 nt2□□□□□ -2.09
HDA2Q06629 GYP5YPL249C 2685 nt2□□□□□ -2.09
HDA2Q06629 RPS26AYGL189C 360 nt1.99□□□□□ -2.09
HDA2Q06629 YJL052C-AYJL052C-A 120 nt1.99□□□□□ -2.09
HDA2Q06629 snR47snR47 99 nt1.99□□□□□ -2.09
HDA2Q06629 UTP22YGR090W 3714 nt1.99□□□□□ -2.09
HDA2Q06629 REV3YPL167C 4515 nt1.98□□□□□ -2.09
HDA2Q06629 EAF1YDR359C 2949 nt1.98□□□□□ -2.09
HDA2Q06629 SEC1YDR164C 2175 nt1.98□□□□□ -2.09
HDA2Q06629 SPP41YDR464W 4308 nt1.98□□□□□ -2.09
HDA2Q06629 SEC31YDL195W 3822 nt1.98□□□□□ -2.09
HDA2Q06629 COA6YMR244C-A 315 nt1.98□□□□□ -2.09
HDA2Q06629 GLG1YKR058W 1851 nt1.98□□□□□ -2.09
HDA2Q06629 POL5YEL055C 3069 nt1.98□□□□□ -2.09
HDA2Q06629 SKI3YPR189W 4299 nt1.96□□□□□ -2.1
HDA2Q06629 ORC3YLL004W 1851 nt1.96□□□□□ -2.1
HDA2Q06629 UBR2YLR024C 5619 nt1.96□□□□□ -2.1
HDA2Q06629 BRE1YDL074C 2103 nt1.96□□□□□ -2.1
HDA2Q06629 YAR009CYAR009C 3591 nt1.95□□□□□ -2.1
HDA2Q06629 YHR214C-BYHR214C-B 5382 nt1.95□□□□□ -2.1
HDA2Q06629 snR64snR64 101 nt1.95□□□□□ -2.1
HDA2Q06629 snR50snR50 90 nt1.95□□□□□ -2.1
HDA2Q06629 YLR419WYLR419W 4308 nt1.94□□□□□ -2.1
HDA2Q06629 TBS1YBR150C 3285 nt1.94□□□□□ -2.1
HDA2Q06629 FKS1YLR342W 5631 nt1.94□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 8.1 ms