Protein–RNA interactions for Protein: P62820

RAB1A, Ras-related protein Rab-1A, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1AP62820 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAB1AP62820 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RAB1AP62820 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
RAB1AP62820 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAB1AP62820 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAB1AP62820 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.58■□□□□ 0.4
RAB1AP62820 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB1AP62820 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB1AP62820 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
RAB1AP62820 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RAB1AP62820 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB1AP62820 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.58■□□□□ 0.4
RAB1AP62820 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
RAB1AP62820 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.58■□□□□ 0.4
RAB1AP62820 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.58■□□□□ 0.4
RAB1AP62820 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.58■□□□□ 0.4
RAB1AP62820 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB1AP62820 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB1AP62820 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RAB1AP62820 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.58■□□□□ 0.4
RAB1AP62820 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB1AP62820 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB1AP62820 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.58■□□□□ 0.4
RAB1AP62820 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.57■□□□□ 0.4
RAB1AP62820 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAB1AP62820 SMG8-203ENST00000578922 2178 ntBASIC17.57■□□□□ 0.4
RAB1AP62820 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAB1AP62820 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB1AP62820 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.57■□□□□ 0.4
RAB1AP62820 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB1AP62820 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAB1AP62820 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.57■□□□□ 0.4
RAB1AP62820 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.57■□□□□ 0.4
RAB1AP62820 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.57■□□□□ 0.4
RAB1AP62820 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB1AP62820 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB1AP62820 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB1AP62820 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.57■□□□□ 0.4
RAB1AP62820 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB1AP62820 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.57■□□□□ 0.4
RAB1AP62820 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.57■□□□□ 0.4
RAB1AP62820 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.57■□□□□ 0.4
RAB1AP62820 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.57■□□□□ 0.4
RAB1AP62820 AC083880.1-201ENST00000608266 535 ntBASIC17.57■□□□□ 0.4
RAB1AP62820 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.57■□□□□ 0.4
RAB1AP62820 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.57■□□□□ 0.4
RAB1AP62820 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.57■□□□□ 0.4
RAB1AP62820 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAB1AP62820 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAB1AP62820 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RAB1AP62820 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.56■□□□□ 0.4
RAB1AP62820 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB1AP62820 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB1AP62820 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
RAB1AP62820 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB1AP62820 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RAB1AP62820 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAB1AP62820 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.56■□□□□ 0.4
RAB1AP62820 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB1AP62820 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAB1AP62820 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB1AP62820 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
RAB1AP62820 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB1AP62820 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.56■□□□□ 0.4
RAB1AP62820 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB1AP62820 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RAB1AP62820 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB1AP62820 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RAB1AP62820 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB1AP62820 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RAB1AP62820 LINC01521-201ENST00000504184 1943 ntBASIC17.55■□□□□ 0.4
RAB1AP62820 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB1AP62820 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RAB1AP62820 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.55■□□□□ 0.4
RAB1AP62820 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB1AP62820 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RAB1AP62820 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB1AP62820 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB1AP62820 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.55■□□□□ 0.4
RAB1AP62820 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB1AP62820 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB1AP62820 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB1AP62820 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.55■□□□□ 0.4
RAB1AP62820 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB1AP62820 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB1AP62820 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB1AP62820 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB1AP62820 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB1AP62820 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.54■□□□□ 0.4
RAB1AP62820 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB1AP62820 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB1AP62820 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
RAB1AP62820 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.54■□□□□ 0.4
RAB1AP62820 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB1AP62820 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RAB1AP62820 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB1AP62820 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB1AP62820 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
RAB1AP62820 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.54■□□□□ 0.4
RAB1AP62820 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms