Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DEFA3P59666 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
DEFA3P59666 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.6■□□□□ 0.41
DEFA3P59666 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DEFA3P59666 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.6■□□□□ 0.41
DEFA3P59666 NOC2LP1-202ENST00000452600 2235 ntBASIC17.6■□□□□ 0.41
DEFA3P59666 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
DEFA3P59666 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DEFA3P59666 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
DEFA3P59666 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DEFA3P59666 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DEFA3P59666 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DEFA3P59666 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DEFA3P59666 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
DEFA3P59666 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DEFA3P59666 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DEFA3P59666 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
DEFA3P59666 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.6■□□□□ 0.41
DEFA3P59666 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.6■□□□□ 0.41
DEFA3P59666 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.6■□□□□ 0.41
DEFA3P59666 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
DEFA3P59666 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DEFA3P59666 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
DEFA3P59666 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
DEFA3P59666 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
DEFA3P59666 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
DEFA3P59666 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.59■□□□□ 0.41
DEFA3P59666 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
DEFA3P59666 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
DEFA3P59666 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.59■□□□□ 0.41
DEFA3P59666 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DEFA3P59666 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.59■□□□□ 0.41
DEFA3P59666 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.59■□□□□ 0.41
DEFA3P59666 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.59■□□□□ 0.41
DEFA3P59666 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
DEFA3P59666 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DEFA3P59666 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DEFA3P59666 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
DEFA3P59666 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DEFA3P59666 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DEFA3P59666 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.59■□□□□ 0.41
DEFA3P59666 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DEFA3P59666 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.59■□□□□ 0.41
DEFA3P59666 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DEFA3P59666 KRT18P24-201ENST00000344739 1156 ntBASIC17.59■□□□□ 0.41
DEFA3P59666 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.59■□□□□ 0.41
DEFA3P59666 AC087239.1-201ENST00000622671 572 ntBASIC17.59■□□□□ 0.41
DEFA3P59666 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.59■□□□□ 0.41
DEFA3P59666 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
DEFA3P59666 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DEFA3P59666 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DEFA3P59666 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
DEFA3P59666 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DEFA3P59666 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
DEFA3P59666 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
DEFA3P59666 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
DEFA3P59666 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.58■□□□□ 0.41
DEFA3P59666 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
DEFA3P59666 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
DEFA3P59666 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
DEFA3P59666 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DEFA3P59666 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DEFA3P59666 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.58■□□□□ 0.4
DEFA3P59666 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.58■□□□□ 0.4
DEFA3P59666 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
DEFA3P59666 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DEFA3P59666 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.58■□□□□ 0.4
DEFA3P59666 SRP68-213ENST00000629930 165 ntTSL 5 BASIC17.58■□□□□ 0.4
DEFA3P59666 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
DEFA3P59666 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DEFA3P59666 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
DEFA3P59666 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
DEFA3P59666 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
DEFA3P59666 AC011484.1-201ENST00000377652 1995 ntBASIC17.58■□□□□ 0.4
DEFA3P59666 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DEFA3P59666 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
DEFA3P59666 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.58■□□□□ 0.4
DEFA3P59666 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DEFA3P59666 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DEFA3P59666 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
DEFA3P59666 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.57■□□□□ 0.4
DEFA3P59666 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.57■□□□□ 0.4
DEFA3P59666 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
DEFA3P59666 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DEFA3P59666 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
DEFA3P59666 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DEFA3P59666 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
DEFA3P59666 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DEFA3P59666 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
DEFA3P59666 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC17.57■□□□□ 0.4
DEFA3P59666 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC17.57■□□□□ 0.4
DEFA3P59666 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC17.57■□□□□ 0.4
DEFA3P59666 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.57■□□□□ 0.4
DEFA3P59666 AC135050.7-201ENST00000624508 2218 ntBASIC17.57■□□□□ 0.4
DEFA3P59666 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DEFA3P59666 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
DEFA3P59666 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
DEFA3P59666 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DEFA3P59666 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
DEFA3P59666 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms