Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CTSKP43235 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.94■□□□□ 0.78
CTSKP43235 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTSKP43235 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.94■□□□□ 0.78
CTSKP43235 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CTSKP43235 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTSKP43235 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CTSKP43235 MIR1224-201ENST00000408193 85 ntBASIC19.94■□□□□ 0.78
CTSKP43235 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.94■□□□□ 0.78
CTSKP43235 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CTSKP43235 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTSKP43235 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CTSKP43235 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.94■□□□□ 0.78
CTSKP43235 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.94■□□□□ 0.78
CTSKP43235 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CTSKP43235 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CTSKP43235 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CTSKP43235 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTSKP43235 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CTSKP43235 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTSKP43235 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CTSKP43235 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTSKP43235 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.93■□□□□ 0.78
CTSKP43235 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.93■□□□□ 0.78
CTSKP43235 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CTSKP43235 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.93■□□□□ 0.78
CTSKP43235 TSPY15P-201ENST00000457163 923 ntBASIC19.93■□□□□ 0.78
CTSKP43235 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.93■□□□□ 0.78
CTSKP43235 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.93■□□□□ 0.78
CTSKP43235 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.93■□□□□ 0.78
CTSKP43235 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.93■□□□□ 0.78
CTSKP43235 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.93■□□□□ 0.78
CTSKP43235 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.93■□□□□ 0.78
CTSKP43235 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.93■□□□□ 0.78
CTSKP43235 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CTSKP43235 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.93■□□□□ 0.78
CTSKP43235 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTSKP43235 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CTSKP43235 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTSKP43235 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CTSKP43235 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTSKP43235 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CTSKP43235 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTSKP43235 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTSKP43235 AC005229.4-201ENST00000610085 2198 ntBASIC19.93■□□□□ 0.78
CTSKP43235 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CTSKP43235 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTSKP43235 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTSKP43235 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTSKP43235 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTSKP43235 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CTSKP43235 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTSKP43235 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.92■□□□□ 0.78
CTSKP43235 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTSKP43235 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTSKP43235 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTSKP43235 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTSKP43235 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
CTSKP43235 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTSKP43235 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTSKP43235 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.92■□□□□ 0.78
CTSKP43235 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.92■□□□□ 0.78
CTSKP43235 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.92■□□□□ 0.78
CTSKP43235 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.92■□□□□ 0.78
CTSKP43235 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CTSKP43235 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTSKP43235 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTSKP43235 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTSKP43235 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTSKP43235 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CTSKP43235 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.92■□□□□ 0.78
CTSKP43235 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CTSKP43235 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CTSKP43235 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTSKP43235 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CTSKP43235 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.91■□□□□ 0.78
CTSKP43235 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTSKP43235 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CTSKP43235 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTSKP43235 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CTSKP43235 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.91■□□□□ 0.78
CTSKP43235 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.91■□□□□ 0.78
CTSKP43235 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CTSKP43235 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.91■□□□□ 0.78
CTSKP43235 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.91■□□□□ 0.78
CTSKP43235 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.91■□□□□ 0.78
CTSKP43235 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CTSKP43235 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.91■□□□□ 0.78
CTSKP43235 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTSKP43235 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.91■□□□□ 0.78
CTSKP43235 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTSKP43235 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CTSKP43235 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CTSKP43235 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTSKP43235 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
CTSKP43235 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTSKP43235 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CTSKP43235 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CTSKP43235 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.9■□□□□ 0.78
CTSKP43235 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms