Protein–RNA interactions for Protein: P38961

RRP8, 25S rRNA (adenine(645)-N(1))-methyltransferase, yeastyeast

Known RBP Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP8P38961 SLD3YGL113W 2007 nt1.62□□□□□ -2.15
RRP8P38961 PIP2YOR363C 2991 nt1.62□□□□□ -2.15
RRP8P38961 SMC1YFL008W 3678 nt1.62□□□□□ -2.15
RRP8P38961 FIG4YNL325C 2640 nt1.61□□□□□ -2.15
RRP8P38961 YDR354C-AYDR354C-A 144 nt1.61□□□□□ -2.15
RRP8P38961 POL5YEL055C 3069 nt1.6□□□□□ -2.15
RRP8P38961 YDL196WYDL196W 330 nt1.6□□□□□ -2.15
RRP8P38961 YOR161W-BYOR161W-B 261 nt1.6□□□□□ -2.15
RRP8P38961 MSH3YCR092C 3057 nt1.59□□□□□ -2.15
RRP8P38961 tH(GUG)E1tH(GUG)E1 72 nt1.59□□□□□ -2.15
RRP8P38961 tH(GUG)E2tH(GUG)E2 72 nt1.59□□□□□ -2.15
RRP8P38961 tH(GUG)G1tH(GUG)G1 72 nt1.59□□□□□ -2.15
RRP8P38961 tH(GUG)G2tH(GUG)G2 72 nt1.59□□□□□ -2.15
RRP8P38961 tH(GUG)HtH(GUG)H 72 nt1.59□□□□□ -2.15
RRP8P38961 tH(GUG)KtH(GUG)K 72 nt1.59□□□□□ -2.15
RRP8P38961 tH(GUG)MtH(GUG)M 72 nt1.59□□□□□ -2.15
RRP8P38961 YGR151CYGR151C 336 nt1.59□□□□□ -2.15
RRP8P38961 YOR072W-BYOR072W-B 162 nt1.59□□□□□ -2.15
RRP8P38961 EST2YLR318W 2655 nt1.59□□□□□ -2.16
RRP8P38961 CDC25YLR310C 4770 nt1.58□□□□□ -2.16
RRP8P38961 NUP157YER105C 4176 nt1.58□□□□□ -2.16
RRP8P38961 KAP122YGL016W 3246 nt1.58□□□□□ -2.16
RRP8P38961 YDL206WYDL206W 2289 nt1.57□□□□□ -2.16
RRP8P38961 YEL014CYEL014C 306 nt1.57□□□□□ -2.16
RRP8P38961 YIL134C-AYIL134C-A 204 nt1.57□□□□□ -2.16
RRP8P38961 snR46snR46 197 nt1.57□□□□□ -2.16
RRP8P38961 PRP39YML046W 1890 nt1.56□□□□□ -2.16
RRP8P38961 SEC21YNL287W 2808 nt1.55□□□□□ -2.16
RRP8P38961 APL3YBL037W 3078 nt1.55□□□□□ -2.16
RRP8P38961 YNL338WYNL338W 159 nt1.55□□□□□ -2.16
RRP8P38961 ULI1YFR026C 510 nt1.54□□□□□ -2.16
RRP8P38961 YJL026C-AYJL026C-A 222 nt1.54□□□□□ -2.16
RRP8P38961 RPL33BYOR234C 324 nt1.54□□□□□ -2.16
RRP8P38961 TRS65YGR166W 1683 nt1.54□□□□□ -2.16
RRP8P38961 YGR130CYGR130C 2451 nt1.53□□□□□ -2.16
RRP8P38961 ALY2YJL084C 3141 nt1.53□□□□□ -2.17
RRP8P38961 PIK1YNL267W 3201 nt1.52□□□□□ -2.17
RRP8P38961 HKR1YDR420W 5409 nt1.52□□□□□ -2.17
RRP8P38961 PMP1YCR024C-A 123 nt1.52□□□□□ -2.17
RRP8P38961 snR52snR52 92 nt1.52□□□□□ -2.17
RRP8P38961 COY1YKL179C 2040 nt1.52□□□□□ -2.17
RRP8P38961 MSN5YDR335W 3675 nt1.52□□□□□ -2.17
RRP8P38961 STO1YMR125W 2586 nt1.52□□□□□ -2.17
RRP8P38961 SWI4YER111C 3282 nt1.51□□□□□ -2.17
RRP8P38961 tQ(UUG)E2tQ(UUG)E2 72 nt1.51□□□□□ -2.17
RRP8P38961 SEC3YER008C 4011 nt1.5□□□□□ -2.17
RRP8P38961 YBR221W-AYBR221W-A 105 nt1.5□□□□□ -2.17
RRP8P38961 NUP145YGL092W 3954 nt1.5□□□□□ -2.17
RRP8P38961 NUP188YML103C 4968 nt1.5□□□□□ -2.17
RRP8P38961 YLL020CYLL020C 306 nt1.49□□□□□ -2.17
RRP8P38961 RPS30BYOR182C 192 nt1.49□□□□□ -2.17
RRP8P38961 FYV8YGR196C 2454 nt1.49□□□□□ -2.17
RRP8P38961 CDC39YCR093W 6327 nt1.49□□□□□ -2.17
RRP8P38961 YAR009CYAR009C 3591 nt1.49□□□□□ -2.17
RRP8P38961 RSM22YKL155C 1887 nt1.48□□□□□ -2.17
RRP8P38961 YBR200W-AYBR200W-A 165 nt1.48□□□□□ -2.17
RRP8P38961 SET3YKR029C 2256 nt1.48□□□□□ -2.17
RRP8P38961 HAL9YOL089C 3093 nt1.47□□□□□ -2.17
RRP8P38961 PAA1YDR071C 576 nt1.47□□□□□ -2.17
RRP8P38961 WAR1YML076C 2835 nt1.47□□□□□ -2.17
RRP8P38961 COX12YLR038C 252 nt1.46□□□□□ -2.18
RRP8P38961 YLR342W-AYLR342W-A 174 nt1.46□□□□□ -2.18
RRP8P38961 YNL211CYNL211C 261 nt1.46□□□□□ -2.18
RRP8P38961 PET127YOR017W 2403 nt1.46□□□□□ -2.18
RRP8P38961 PAN2YGL094C 3348 nt1.45□□□□□ -2.18
RRP8P38961 YCR038W-AYCR038W-A 126 nt1.43□□□□□ -2.18
RRP8P38961 LAA1YJL207C 6045 nt1.43□□□□□ -2.18
RRP8P38961 YDL007C-AYDL007C-A 258 nt1.42□□□□□ -2.18
RRP8P38961 tV(UAC)BtV(UAC)B 74 nt1.42□□□□□ -2.18
RRP8P38961 tV(UAC)DtV(UAC)D 74 nt1.42□□□□□ -2.18
RRP8P38961 GEA2YEL022W 4380 nt1.42□□□□□ -2.18
RRP8P38961 YFR012W-AYFR012W-A 87 nt1.41□□□□□ -2.18
RRP8P38961 YAL067W-AYAL067W-A 228 nt1.41□□□□□ -2.18
RRP8P38961 YBL053WYBL053W 375 nt1.41□□□□□ -2.18
RRP8P38961 CLU1YMR012W 3834 nt1.4□□□□□ -2.19
RRP8P38961 YPL044CYPL044C 549 nt1.4□□□□□ -2.19
RRP8P38961 YCS4YLR272C 3531 nt1.4□□□□□ -2.19
RRP8P38961 TTI1YKL033W 3117 nt1.4□□□□□ -2.19
RRP8P38961 EAF1YDR359C 2949 nt1.4□□□□□ -2.19
RRP8P38961 IML1YJR138W 4755 nt1.4□□□□□ -2.19
RRP8P38961 RAD9YDR217C 3930 nt1.4□□□□□ -2.19
RRP8P38961 APL1YJR005W 2103 nt1.39□□□□□ -2.19
RRP8P38961 ASE1YOR058C 2658 nt1.38□□□□□ -2.19
RRP8P38961 YIL020C-AYIL020C-A 339 nt1.37□□□□□ -2.19
RRP8P38961 YOR161W-AYOR161W-A 81 nt1.37□□□□□ -2.19
RRP8P38961 YER053C-AYER053C-A 114 nt1.36□□□□□ -2.19
RRP8P38961 YOR381W-AYOR381W-A 168 nt1.36□□□□□ -2.19
RRP8P38961 SIP4YJL089W 2490 nt1.35□□□□□ -2.19
RRP8P38961 CMC4YMR194C-B 222 nt1.35□□□□□ -2.19
RRP8P38961 YNL284C-BYNL284C-B 5268 nt1.35□□□□□ -2.19
RRP8P38961 YEL073CYEL073C 324 nt1.34□□□□□ -2.19
RRP8P38961 STB6YKL072W 2301 nt1.34□□□□□ -2.2
RRP8P38961 YIL002W-AYIL002W-A 210 nt1.33□□□□□ -2.2
RRP8P38961 MYO1YHR023W 5787 nt1.32□□□□□ -2.2
RRP8P38961 NST1YNL091W 3723 nt1.32□□□□□ -2.2
RRP8P38961 NOP9YJL010C 2001 nt1.32□□□□□ -2.2
RRP8P38961 YGL123C-AYGL123C-A 231 nt1.31□□□□□ -2.2
RRP8P38961 BUD3YCL014W 4911 nt1.3□□□□□ -2.2
RRP8P38961 Q0092Q0092 141 nt1.29□□□□□ -2.2
RRP8P38961 ROM2YLR371W 4071 nt1.29□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 14.1 ms