Protein–RNA interactions for Protein: P38878

LNP1, Endoplasmic reticulum junction formation protein lunapark, yeastyeast

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LNP1P38878 YOR345CYOR345C 351 nt1.49□□□□□ -2.17
LNP1P38878 CFT1YDR301W 4074 nt1.49□□□□□ -2.17
LNP1P38878 SET3YKR029C 2256 nt1.49□□□□□ -2.17
LNP1P38878 AIM44YPL158C 2277 nt1.49□□□□□ -2.17
LNP1P38878 PMD1YER132C 5262 nt1.48□□□□□ -2.17
LNP1P38878 FIG4YNL325C 2640 nt1.48□□□□□ -2.17
LNP1P38878 BST1YFL025C 3090 nt1.48□□□□□ -2.17
LNP1P38878 SEC3YER008C 4011 nt1.48□□□□□ -2.17
LNP1P38878 PET127YOR017W 2403 nt1.46□□□□□ -2.18
LNP1P38878 ULI1YFR026C 510 nt1.46□□□□□ -2.18
LNP1P38878 RPL33BYOR234C 324 nt1.46□□□□□ -2.18
LNP1P38878 CDC39YCR093W 6327 nt1.46□□□□□ -2.18
LNP1P38878 FYV8YGR196C 2454 nt1.46□□□□□ -2.18
LNP1P38878 PRP39YML046W 1890 nt1.46□□□□□ -2.18
LNP1P38878 SPC110YDR356W 2835 nt1.45□□□□□ -2.18
LNP1P38878 YEL014CYEL014C 306 nt1.45□□□□□ -2.18
LNP1P38878 SSK2YNR031C 4740 nt1.45□□□□□ -2.18
LNP1P38878 DNF3YMR162C 4971 nt1.45□□□□□ -2.18
LNP1P38878 PIK1YNL267W 3201 nt1.45□□□□□ -2.18
LNP1P38878 MSN5YDR335W 3675 nt1.44□□□□□ -2.18
LNP1P38878 EST2YLR318W 2655 nt1.44□□□□□ -2.18
LNP1P38878 ROM2YLR371W 4071 nt1.44□□□□□ -2.18
LNP1P38878 NUP188YML103C 4968 nt1.44□□□□□ -2.18
LNP1P38878 CCH1YGR217W 6120 nt1.43□□□□□ -2.18
LNP1P38878 PAA1YDR071C 576 nt1.43□□□□□ -2.18
LNP1P38878 YAL067W-AYAL067W-A 228 nt1.43□□□□□ -2.18
LNP1P38878 COX12YLR038C 252 nt1.43□□□□□ -2.18
LNP1P38878 YLR294CYLR294C 330 nt1.43□□□□□ -2.18
LNP1P38878 COA6YMR244C-A 315 nt1.43□□□□□ -2.18
LNP1P38878 COY1YKL179C 2040 nt1.43□□□□□ -2.18
LNP1P38878 YLL054CYLL054C 2532 nt1.43□□□□□ -2.18
LNP1P38878 ASE1YOR058C 2658 nt1.43□□□□□ -2.18
LNP1P38878 CLU1YMR012W 3834 nt1.42□□□□□ -2.18
LNP1P38878 KAP120YPL125W 3099 nt1.42□□□□□ -2.18
LNP1P38878 NUP192YJL039C 5052 nt1.42□□□□□ -2.18
LNP1P38878 SXM1YDR395W 2835 nt1.42□□□□□ -2.18
LNP1P38878 STO1YMR125W 2586 nt1.42□□□□□ -2.18
LNP1P38878 YBR221W-AYBR221W-A 105 nt1.42□□□□□ -2.18
LNP1P38878 YGR151CYGR151C 336 nt1.41□□□□□ -2.18
LNP1P38878 APL1YJR005W 2103 nt1.41□□□□□ -2.18
LNP1P38878 YLR342W-AYLR342W-A 174 nt1.41□□□□□ -2.18
LNP1P38878 YNL211CYNL211C 261 nt1.41□□□□□ -2.18
LNP1P38878 TTI1YKL033W 3117 nt1.4□□□□□ -2.19
LNP1P38878 CDC25YLR310C 4770 nt1.39□□□□□ -2.19
LNP1P38878 RPS30BYOR182C 192 nt1.39□□□□□ -2.19
LNP1P38878 NUP145YGL092W 3954 nt1.39□□□□□ -2.19
LNP1P38878 NUP157YER105C 4176 nt1.38□□□□□ -2.19
LNP1P38878 PMP1YCR024C-A 123 nt1.38□□□□□ -2.19
LNP1P38878 tQ(UUG)E2tQ(UUG)E2 72 nt1.38□□□□□ -2.19
LNP1P38878 STB6YKL072W 2301 nt1.37□□□□□ -2.19
LNP1P38878 TRS65YGR166W 1683 nt1.37□□□□□ -2.19
LNP1P38878 EAF1YDR359C 2949 nt1.37□□□□□ -2.19
LNP1P38878 BRR2YER172C 6492 nt1.36□□□□□ -2.19
LNP1P38878 CMC4YMR194C-B 222 nt1.35□□□□□ -2.19
LNP1P38878 NOP9YJL010C 2001 nt1.35□□□□□ -2.19
LNP1P38878 YPL044CYPL044C 549 nt1.34□□□□□ -2.19
LNP1P38878 CAT8YMR280C 4302 nt1.34□□□□□ -2.2
LNP1P38878 AZF1YOR113W 2745 nt1.34□□□□□ -2.2
LNP1P38878 FIG2YCR089W 4830 nt1.34□□□□□ -2.2
LNP1P38878 PRP16YKR086W 3216 nt1.34□□□□□ -2.2
LNP1P38878 SEC21YNL287W 2808 nt1.34□□□□□ -2.2
LNP1P38878 HKR1YDR420W 5409 nt1.33□□□□□ -2.2
LNP1P38878 snR52snR52 92 nt1.33□□□□□ -2.2
LNP1P38878 YIL002W-AYIL002W-A 210 nt1.32□□□□□ -2.2
LNP1P38878 YBR200W-AYBR200W-A 165 nt1.32□□□□□ -2.2
LNP1P38878 WAR1YML076C 2835 nt1.32□□□□□ -2.2
LNP1P38878 YLL020CYLL020C 306 nt1.31□□□□□ -2.2
LNP1P38878 YOR381W-AYOR381W-A 168 nt1.31□□□□□ -2.2
LNP1P38878 YCR038W-AYCR038W-A 126 nt1.3□□□□□ -2.2
LNP1P38878 YEL073CYEL073C 324 nt1.3□□□□□ -2.2
LNP1P38878 YFR012W-AYFR012W-A 87 nt1.3□□□□□ -2.2
LNP1P38878 RSM22YKL155C 1887 nt1.29□□□□□ -2.2
LNP1P38878 YNL338WYNL338W 159 nt1.29□□□□□ -2.2
LNP1P38878 YGL123C-AYGL123C-A 231 nt1.28□□□□□ -2.2
LNP1P38878 YER053C-AYER053C-A 114 nt1.27□□□□□ -2.21
LNP1P38878 COX5BYIL111W 456 nt1.27□□□□□ -2.21
LNP1P38878 YOR161W-AYOR161W-A 81 nt1.27□□□□□ -2.21
LNP1P38878 MSH3YCR092C 3057 nt1.26□□□□□ -2.21
LNP1P38878 YLR041WYLR041W 321 nt1.26□□□□□ -2.21
LNP1P38878 BFR2YDR299W 1605 nt1.26□□□□□ -2.21
LNP1P38878 YDL073WYDL073W 2955 nt1.25□□□□□ -2.21
LNP1P38878 YLR282CYLR282C 342 nt1.25□□□□□ -2.21
LNP1P38878 CDC31YOR257W 486 nt1.25□□□□□ -2.21
LNP1P38878 YIL020C-AYIL020C-A 339 nt1.24□□□□□ -2.21
LNP1P38878 LAA1YJL207C 6045 nt1.23□□□□□ -2.21
LNP1P38878 RAD9YDR217C 3930 nt1.23□□□□□ -2.21
LNP1P38878 RPL26BYGR034W 384 nt1.21□□□□□ -2.22
LNP1P38878 snR190snR190 190 nt1.21□□□□□ -2.22
LNP1P38878 PRP42YDR235W 1635 nt1.21□□□□□ -2.22
LNP1P38878 YDL007C-AYDL007C-A 258 nt1.2□□□□□ -2.22
LNP1P38878 YKL100W-AYKL100W-A 90 nt1.2□□□□□ -2.22
LNP1P38878 NST1YNL091W 3723 nt1.18□□□□□ -2.22
LNP1P38878 GEA2YEL022W 4380 nt1.18□□□□□ -2.22
LNP1P38878 RPM2YML091C 3609 nt1.17□□□□□ -2.22
LNP1P38878 YGR130CYGR130C 2451 nt1.16□□□□□ -2.22
LNP1P38878 YML002WYML002W 2214 nt1.16□□□□□ -2.22
LNP1P38878 SMC1YFL008W 3678 nt1.15□□□□□ -2.23
LNP1P38878 YBL053WYBL053W 375 nt1.15□□□□□ -2.23
LNP1P38878 PRP5YBR237W 2550 nt1.15□□□□□ -2.23
LNP1P38878 SEC8YPR055W 3198 nt1.14□□□□□ -2.23
Retrieved 100 of 7,029 protein–RNA pairs in 1488.3 ms