Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFC1P35251 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
RFC1P35251 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.12■□□□□ 0.97
RFC1P35251 TCF3P1-201ENST00000423021 1937 ntBASIC21.12■□□□□ 0.97
RFC1P35251 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFC1P35251 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFC1P35251 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFC1P35251 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFC1P35251 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFC1P35251 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.11■□□□□ 0.97
RFC1P35251 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
RFC1P35251 BX276092.2-201ENST00000417668 665 ntBASIC21.11■□□□□ 0.97
RFC1P35251 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFC1P35251 NCF1B-203ENST00000435988 1254 ntBASIC21.11■□□□□ 0.97
RFC1P35251 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.11■□□□□ 0.97
RFC1P35251 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFC1P35251 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RFC1P35251 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.11■□□□□ 0.97
RFC1P35251 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFC1P35251 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
RFC1P35251 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFC1P35251 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.11■□□□□ 0.97
RFC1P35251 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFC1P35251 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFC1P35251 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.11■□□□□ 0.97
RFC1P35251 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
RFC1P35251 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
RFC1P35251 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RFC1P35251 LSM12P1-201ENST00000411836 588 ntBASIC21.1■□□□□ 0.97
RFC1P35251 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.1■□□□□ 0.97
RFC1P35251 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.1■□□□□ 0.97
RFC1P35251 C2orf69P4-201ENST00000565394 541 ntBASIC21.1■□□□□ 0.97
RFC1P35251 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.1■□□□□ 0.97
RFC1P35251 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RFC1P35251 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFC1P35251 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFC1P35251 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.09■□□□□ 0.97
RFC1P35251 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
RFC1P35251 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.09■□□□□ 0.97
RFC1P35251 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.09■□□□□ 0.97
RFC1P35251 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFC1P35251 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFC1P35251 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
RFC1P35251 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
RFC1P35251 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.09■□□□□ 0.97
RFC1P35251 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFC1P35251 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFC1P35251 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFC1P35251 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
RFC1P35251 BX119927.1-201ENST00000636596 1552 ntBASIC21.09■□□□□ 0.97
RFC1P35251 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFC1P35251 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
RFC1P35251 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFC1P35251 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFC1P35251 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.08■□□□□ 0.97
RFC1P35251 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
RFC1P35251 AFG3L1P-217ENST00000557444 2447 ntBASIC21.08■□□□□ 0.97
RFC1P35251 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.08■□□□□ 0.97
RFC1P35251 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFC1P35251 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
RFC1P35251 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
RFC1P35251 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFC1P35251 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RFC1P35251 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
RFC1P35251 MIPEPP3-201ENST00000412105 444 ntBASIC21.08■□□□□ 0.97
RFC1P35251 GUSBP6-202ENST00000438529 1198 ntBASIC21.08■□□□□ 0.97
RFC1P35251 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RFC1P35251 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFC1P35251 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RFC1P35251 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.08■□□□□ 0.97
RFC1P35251 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.08■□□□□ 0.97
RFC1P35251 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFC1P35251 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
RFC1P35251 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.08■□□□□ 0.96
RFC1P35251 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RFC1P35251 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RFC1P35251 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
RFC1P35251 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
RFC1P35251 AL691432.2-201ENST00000607222 2038 ntBASIC21.07■□□□□ 0.96
RFC1P35251 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
RFC1P35251 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.07■□□□□ 0.96
RFC1P35251 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
RFC1P35251 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFC1P35251 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RFC1P35251 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RFC1P35251 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.07■□□□□ 0.96
RFC1P35251 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.07■□□□□ 0.96
RFC1P35251 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.07■□□□□ 0.96
RFC1P35251 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.07■□□□□ 0.96
RFC1P35251 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.07■□□□□ 0.96
RFC1P35251 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.07■□□□□ 0.96
RFC1P35251 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.07■□□□□ 0.96
RFC1P35251 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFC1P35251 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFC1P35251 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFC1P35251 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFC1P35251 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.07■□□□□ 0.96
RFC1P35251 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
RFC1P35251 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFC1P35251 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms