Protein–RNA interactions for Protein: P23394

PRP28, Pre-mRNA-splicing ATP-dependent RNA helicase PRP28, yeastyeast

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP28P23394 PAA1YDR071C 576 nt1.7□□□□□ -2.14
PRP28P23394 EMC5YIL027C 426 nt1.7□□□□□ -2.14
PRP28P23394 YPL044CYPL044C 549 nt1.7□□□□□ -2.14
PRP28P23394 SKI3YPR189W 4299 nt1.7□□□□□ -2.14
PRP28P23394 SMC4YLR086W 4257 nt1.7□□□□□ -2.14
PRP28P23394 DNF3YMR162C 4971 nt1.69□□□□□ -2.14
PRP28P23394 COX12YLR038C 252 nt1.69□□□□□ -2.14
PRP28P23394 RTP1YMR185W 2946 nt1.68□□□□□ -2.14
PRP28P23394 Q0143Q0143 153 nt1.68□□□□□ -2.14
PRP28P23394 snR14snR14 160 nt1.68□□□□□ -2.14
PRP28P23394 CTF4YPR135W 2784 nt1.67□□□□□ -2.14
PRP28P23394 SLX4YLR135W 2247 nt1.67□□□□□ -2.14
PRP28P23394 UFD2YDL190C 2886 nt1.66□□□□□ -2.14
PRP28P23394 YCS4YLR272C 3531 nt1.66□□□□□ -2.14
PRP28P23394 YMR272W-BYMR272W-B 108 nt1.66□□□□□ -2.14
PRP28P23394 YIL020C-AYIL020C-A 339 nt1.65□□□□□ -2.15
PRP28P23394 APL1YJR005W 2103 nt1.65□□□□□ -2.15
PRP28P23394 TTI1YKL033W 3117 nt1.64□□□□□ -2.15
PRP28P23394 YJL022WYJL022W 309 nt1.64□□□□□ -2.15
PRP28P23394 ALY2YJL084C 3141 nt1.63□□□□□ -2.15
PRP28P23394 PMD1YER132C 5262 nt1.63□□□□□ -2.15
PRP28P23394 KIP1YBL063W 3336 nt1.63□□□□□ -2.15
PRP28P23394 COA6YMR244C-A 315 nt1.62□□□□□ -2.15
PRP28P23394 YBR221W-AYBR221W-A 105 nt1.62□□□□□ -2.15
PRP28P23394 SXM1YDR395W 2835 nt1.61□□□□□ -2.15
PRP28P23394 YHL015W-AYHL015W-A 84 nt1.61□□□□□ -2.15
PRP28P23394 YAL067W-AYAL067W-A 228 nt1.61□□□□□ -2.15
PRP28P23394 YNL211CYNL211C 261 nt1.61□□□□□ -2.15
PRP28P23394 MMS4YBR098W 2076 nt1.61□□□□□ -2.15
PRP28P23394 POL5YEL055C 3069 nt1.6□□□□□ -2.15
PRP28P23394 NUP157YER105C 4176 nt1.6□□□□□ -2.15
PRP28P23394 SNU13YEL026W 381 nt1.6□□□□□ -2.15
PRP28P23394 YIL002W-AYIL002W-A 210 nt1.6□□□□□ -2.15
PRP28P23394 YAR009CYAR009C 3591 nt1.6□□□□□ -2.15
PRP28P23394 TRM3YDL112W 4311 nt1.59□□□□□ -2.15
PRP28P23394 KAP122YGL016W 3246 nt1.59□□□□□ -2.15
PRP28P23394 YOR102WYOR102W 351 nt1.59□□□□□ -2.15
PRP28P23394 snR48snR48 113 nt1.59□□□□□ -2.15
PRP28P23394 SPC110YDR356W 2835 nt1.58□□□□□ -2.16
PRP28P23394 PAN2YGL094C 3348 nt1.58□□□□□ -2.16
PRP28P23394 YER053C-AYER053C-A 114 nt1.57□□□□□ -2.16
PRP28P23394 YLL054CYLL054C 2532 nt1.57□□□□□ -2.16
PRP28P23394 BST1YFL025C 3090 nt1.56□□□□□ -2.16
PRP28P23394 YNL205CYNL205C 423 nt1.56□□□□□ -2.16
PRP28P23394 CHS1YNL192W 3396 nt1.56□□□□□ -2.16
PRP28P23394 TRM732YMR259C 4263 nt1.55□□□□□ -2.16
PRP28P23394 CDC31YOR257W 486 nt1.55□□□□□ -2.16
PRP28P23394 PRP5YBR237W 2550 nt1.55□□□□□ -2.16
PRP28P23394 IRA1YBR140C 9279 nt1.55□□□□□ -2.16
PRP28P23394 YGL123C-AYGL123C-A 231 nt1.54□□□□□ -2.16
PRP28P23394 YOR161W-AYOR161W-A 81 nt1.54□□□□□ -2.16
PRP28P23394 STO1YMR125W 2586 nt1.54□□□□□ -2.16
PRP28P23394 BRR2YER172C 6492 nt1.54□□□□□ -2.16
PRP28P23394 MEC1YBR136W 7107 nt1.54□□□□□ -2.16
PRP28P23394 SET3YKR029C 2256 nt1.54□□□□□ -2.16
PRP28P23394 SMC1YFL008W 3678 nt1.53□□□□□ -2.16
PRP28P23394 FIG2YCR089W 4830 nt1.53□□□□□ -2.16
PRP28P23394 RSM22YKL155C 1887 nt1.52□□□□□ -2.17
PRP28P23394 CFT1YDR301W 4074 nt1.52□□□□□ -2.17
PRP28P23394 snR85snR85 171 nt1.51□□□□□ -2.17
PRP28P23394 YFR012W-AYFR012W-A 87 nt1.51□□□□□ -2.17
PRP28P23394 tL(UAA)QtL(UAA)Q 85 nt1.51□□□□□ -2.17
PRP28P23394 YOR314W-AYOR314W-A 111 nt1.51□□□□□ -2.17
PRP28P23394 REV3YPL167C 4515 nt1.5□□□□□ -2.17
PRP28P23394 CMC4YMR194C-B 222 nt1.5□□□□□ -2.17
PRP28P23394 GEA2YEL022W 4380 nt1.5□□□□□ -2.17
PRP28P23394 SSK2YNR031C 4740 nt1.49□□□□□ -2.17
PRP28P23394 BFR2YDR299W 1605 nt1.48□□□□□ -2.17
PRP28P23394 YGL182CYGL182C 324 nt1.48□□□□□ -2.17
PRP28P23394 NUP188YML103C 4968 nt1.48□□□□□ -2.17
PRP28P23394 HKR1YDR420W 5409 nt1.48□□□□□ -2.17
PRP28P23394 WAR1YML076C 2835 nt1.48□□□□□ -2.17
PRP28P23394 YLR282CYLR282C 342 nt1.47□□□□□ -2.17
PRP28P23394 YCL001W-BYCL001W-B 255 nt1.47□□□□□ -2.17
PRP28P23394 APL3YBL037W 3078 nt1.47□□□□□ -2.17
PRP28P23394 MSN5YDR335W 3675 nt1.46□□□□□ -2.18
PRP28P23394 UTP8YGR128C 2142 nt1.46□□□□□ -2.18
PRP28P23394 NOP9YJL010C 2001 nt1.46□□□□□ -2.18
PRP28P23394 COX5BYIL111W 456 nt1.46□□□□□ -2.18
PRP28P23394 CLU1YMR012W 3834 nt1.46□□□□□ -2.18
PRP28P23394 EST2YLR318W 2655 nt1.46□□□□□ -2.18
PRP28P23394 SWI4YER111C 3282 nt1.46□□□□□ -2.18
PRP28P23394 SEC21YNL287W 2808 nt1.45□□□□□ -2.18
PRP28P23394 EAF1YDR359C 2949 nt1.45□□□□□ -2.18
PRP28P23394 PIK1YNL267W 3201 nt1.45□□□□□ -2.18
PRP28P23394 CCH1YGR217W 6120 nt1.45□□□□□ -2.18
PRP28P23394 PET127YOR017W 2403 nt1.44□□□□□ -2.18
PRP28P23394 FYV8YGR196C 2454 nt1.43□□□□□ -2.18
PRP28P23394 YKL100W-AYKL100W-A 90 nt1.43□□□□□ -2.18
PRP28P23394 YLL020CYLL020C 306 nt1.43□□□□□ -2.18
PRP28P23394 YBL039C-AYBL039C-A 84 nt1.43□□□□□ -2.18
PRP28P23394 STB6YKL072W 2301 nt1.42□□□□□ -2.18
PRP28P23394 YLR422WYLR422W 5799 nt1.42□□□□□ -2.18
PRP28P23394 CHS6YJL099W 2241 nt1.42□□□□□ -2.18
PRP28P23394 ASE1YOR058C 2658 nt1.41□□□□□ -2.18
PRP28P23394 YBR200W-AYBR200W-A 165 nt1.41□□□□□ -2.18
PRP28P23394 YML002WYML002W 2214 nt1.41□□□□□ -2.18
PRP28P23394 TAH1YCR060W 336 nt1.4□□□□□ -2.19
PRP28P23394 tQ(UUG)E2tQ(UUG)E2 72 nt1.4□□□□□ -2.19
PRP28P23394 AZF1YOR113W 2745 nt1.4□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 71.8 ms