Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 ESRRAP1-201ENST00000400596 1257 ntBASIC19.56■□□□□ 0.72
CDH3P22223 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.56■□□□□ 0.72
CDH3P22223 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CDH3P22223 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
CDH3P22223 UNC93B5-201ENST00000530315 699 ntBASIC19.56■□□□□ 0.72
CDH3P22223 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.56■□□□□ 0.72
CDH3P22223 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDH3P22223 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH3P22223 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.56■□□□□ 0.72
CDH3P22223 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH3P22223 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDH3P22223 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDH3P22223 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDH3P22223 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CDH3P22223 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDH3P22223 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDH3P22223 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH3P22223 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH3P22223 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH3P22223 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH3P22223 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDH3P22223 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDH3P22223 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDH3P22223 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH3P22223 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CDH3P22223 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDH3P22223 MIR2861-201ENST00000636310 90 ntBASIC19.55■□□□□ 0.72
CDH3P22223 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH3P22223 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH3P22223 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH3P22223 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH3P22223 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH3P22223 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH3P22223 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH3P22223 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH3P22223 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH3P22223 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH3P22223 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDH3P22223 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDH3P22223 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.54■□□□□ 0.72
CDH3P22223 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDH3P22223 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.54■□□□□ 0.72
CDH3P22223 PNMA6B-201ENST00000538162 1200 ntBASIC19.54■□□□□ 0.72
CDH3P22223 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDH3P22223 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.54■□□□□ 0.72
CDH3P22223 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH3P22223 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH3P22223 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH3P22223 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH3P22223 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH3P22223 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CDH3P22223 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.54■□□□□ 0.72
CDH3P22223 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.54■□□□□ 0.72
CDH3P22223 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDH3P22223 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.54■□□□□ 0.72
CDH3P22223 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CDH3P22223 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.53■□□□□ 0.72
CDH3P22223 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH3P22223 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH3P22223 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH3P22223 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH3P22223 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH3P22223 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH3P22223 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH3P22223 KRT18P29-201ENST00000397031 1267 ntBASIC19.53■□□□□ 0.72
CDH3P22223 AP003097.1-201ENST00000530657 1135 ntBASIC19.53■□□□□ 0.72
CDH3P22223 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.53■□□□□ 0.72
CDH3P22223 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDH3P22223 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDH3P22223 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDH3P22223 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CDH3P22223 PLK5-205ENST00000642079 1969 ntBASIC19.53■□□□□ 0.72
CDH3P22223 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDH3P22223 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDH3P22223 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CDH3P22223 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH3P22223 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH3P22223 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.53■□□□□ 0.72
CDH3P22223 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH3P22223 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDH3P22223 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
CDH3P22223 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH3P22223 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.52■□□□□ 0.72
CDH3P22223 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CDH3P22223 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CDH3P22223 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.52■□□□□ 0.72
CDH3P22223 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH3P22223 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CDH3P22223 AC026366.1-201ENST00000488803 879 ntBASIC19.52■□□□□ 0.72
CDH3P22223 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.52■□□□□ 0.72
CDH3P22223 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH3P22223 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CDH3P22223 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH3P22223 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH3P22223 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.51■□□□□ 0.71
CDH3P22223 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDH3P22223 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
CDH3P22223 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH3P22223 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.51■□□□□ 0.71
CDH3P22223 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms