Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.91■□□□□ 0.62
NCK1P16333 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
NCK1P16333 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
NCK1P16333 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
NCK1P16333 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NCK1P16333 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
NCK1P16333 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NCK1P16333 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NCK1P16333 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NCK1P16333 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NCK1P16333 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NCK1P16333 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NCK1P16333 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NCK1P16333 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.9■□□□□ 0.62
NCK1P16333 AL355001.2-201ENST00000620617 1191 ntBASIC18.9■□□□□ 0.62
NCK1P16333 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NCK1P16333 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.9■□□□□ 0.62
NCK1P16333 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NCK1P16333 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
NCK1P16333 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
NCK1P16333 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
NCK1P16333 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.89■□□□□ 0.61
NCK1P16333 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
NCK1P16333 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NCK1P16333 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCK1P16333 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCK1P16333 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCK1P16333 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCK1P16333 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCK1P16333 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NCK1P16333 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NCK1P16333 AC091305.1-201ENST00000479476 895 ntBASIC18.89■□□□□ 0.61
NCK1P16333 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCK1P16333 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.89■□□□□ 0.61
NCK1P16333 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCK1P16333 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCK1P16333 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
NCK1P16333 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCK1P16333 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCK1P16333 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
NCK1P16333 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCK1P16333 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
NCK1P16333 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCK1P16333 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.89■□□□□ 0.61
NCK1P16333 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.88■□□□□ 0.61
NCK1P16333 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCK1P16333 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.88■□□□□ 0.61
NCK1P16333 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCK1P16333 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.88■□□□□ 0.61
NCK1P16333 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.88■□□□□ 0.61
NCK1P16333 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NCK1P16333 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCK1P16333 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.88■□□□□ 0.61
NCK1P16333 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NCK1P16333 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCK1P16333 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.88■□□□□ 0.61
NCK1P16333 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.88■□□□□ 0.61
NCK1P16333 AC131212.1-201ENST00000613771 668 ntBASIC18.88■□□□□ 0.61
NCK1P16333 AL136967.2-201ENST00000623968 743 ntBASIC18.88■□□□□ 0.61
NCK1P16333 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCK1P16333 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.88■□□□□ 0.61
NCK1P16333 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
NCK1P16333 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.88■□□□□ 0.61
NCK1P16333 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCK1P16333 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.88■□□□□ 0.61
NCK1P16333 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCK1P16333 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.88■□□□□ 0.61
NCK1P16333 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCK1P16333 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NCK1P16333 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NCK1P16333 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NCK1P16333 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NCK1P16333 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
NCK1P16333 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NCK1P16333 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NCK1P16333 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
NCK1P16333 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
NCK1P16333 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NCK1P16333 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.87■□□□□ 0.61
NCK1P16333 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NCK1P16333 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
NCK1P16333 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
NCK1P16333 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.87■□□□□ 0.61
NCK1P16333 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.87■□□□□ 0.61
NCK1P16333 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.87■□□□□ 0.61
NCK1P16333 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.87■□□□□ 0.61
NCK1P16333 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.87■□□□□ 0.61
NCK1P16333 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.87■□□□□ 0.61
NCK1P16333 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.87■□□□□ 0.61
NCK1P16333 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NCK1P16333 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NCK1P16333 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.86■□□□□ 0.61
NCK1P16333 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
NCK1P16333 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NCK1P16333 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NCK1P16333 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NCK1P16333 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.86■□□□□ 0.61
NCK1P16333 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NCK1P16333 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.86■□□□□ 0.61
NCK1P16333 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms