Protein–RNA interactions for Protein: P12868

PEP5, E3 ubiquitin-protein ligase PEP5, yeastyeast

Predictions only

Length 1,029 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PEP5P12868 tH(GUG)HtH(GUG)H 72 nt1.26□□□□□ -2.21
PEP5P12868 tH(GUG)KtH(GUG)K 72 nt1.26□□□□□ -2.21
PEP5P12868 tH(GUG)MtH(GUG)M 72 nt1.26□□□□□ -2.21
PEP5P12868 ECM12YHR021W-A 456 nt1.26□□□□□ -2.21
PEP5P12868 RPL33BYOR234C 324 nt1.26□□□□□ -2.21
PEP5P12868 YPR117WYPR117W 7470 nt1.26□□□□□ -2.21
PEP5P12868 tF(GAA)QtF(GAA)Q 75 nt1.25□□□□□ -2.21
PEP5P12868 YLL020CYLL020C 306 nt1.25□□□□□ -2.21
PEP5P12868 RRT15YLR162W-A 189 nt1.24□□□□□ -2.21
PEP5P12868 SGF11YPL047W 300 nt1.24□□□□□ -2.21
PEP5P12868 CDC39YCR093W 6327 nt1.24□□□□□ -2.21
PEP5P12868 RSM22YKL155C 1887 nt1.24□□□□□ -2.21
PEP5P12868 NPR2YEL062W 1848 nt1.24□□□□□ -2.21
PEP5P12868 YGR130CYGR130C 2451 nt1.23□□□□□ -2.21
PEP5P12868 CDC36YDL165W 576 nt1.22□□□□□ -2.21
PEP5P12868 NUP145YGL092W 3954 nt1.2□□□□□ -2.22
PEP5P12868 RAD9YDR217C 3930 nt1.2□□□□□ -2.22
PEP5P12868 WAR1YML076C 2835 nt1.2□□□□□ -2.22
PEP5P12868 YLL019W-AYLL019W-A 93 nt1.2□□□□□ -2.22
PEP5P12868 YDR354C-AYDR354C-A 144 nt1.19□□□□□ -2.22
PEP5P12868 OLI1Q0130 231 nt1.19□□□□□ -2.22
PEP5P12868 YOR072W-BYOR072W-B 162 nt1.19□□□□□ -2.22
PEP5P12868 YBR200W-AYBR200W-A 165 nt1.19□□□□□ -2.22
PEP5P12868 TTI1YKL033W 3117 nt1.19□□□□□ -2.22
PEP5P12868 YJR029WYJR029W 5268 nt1.18□□□□□ -2.22
PEP5P12868 YPR137C-BYPR137C-B 5268 nt1.18□□□□□ -2.22
PEP5P12868 EAF1YDR359C 2949 nt1.18□□□□□ -2.22
PEP5P12868 YIL020C-AYIL020C-A 339 nt1.18□□□□□ -2.22
PEP5P12868 YBR182C-AYBR182C-A 195 nt1.18□□□□□ -2.22
PEP5P12868 STB6YKL072W 2301 nt1.18□□□□□ -2.22
PEP5P12868 SMC1YFL008W 3678 nt1.18□□□□□ -2.22
PEP5P12868 GEA2YEL022W 4380 nt1.17□□□□□ -2.22
PEP5P12868 BEM2YER155C 6504 nt1.17□□□□□ -2.22
PEP5P12868 YIR030W-AYIR030W-A 384 nt1.17□□□□□ -2.22
PEP5P12868 YOR302WYOR302W 78 nt1.17□□□□□ -2.22
PEP5P12868 SPT7YBR081C 3999 nt1.15□□□□□ -2.22
PEP5P12868 YKU70YMR284W 1809 nt1.15□□□□□ -2.22
PEP5P12868 DOP1YDR141C 5097 nt1.15□□□□□ -2.23
PEP5P12868 tV(UAC)BtV(UAC)B 74 nt1.15□□□□□ -2.23
PEP5P12868 tV(UAC)DtV(UAC)D 74 nt1.15□□□□□ -2.23
PEP5P12868 YJL026C-AYJL026C-A 222 nt1.15□□□□□ -2.23
PEP5P12868 YNL211CYNL211C 261 nt1.15□□□□□ -2.23
PEP5P12868 SIP4YJL089W 2490 nt1.14□□□□□ -2.23
PEP5P12868 NST1YNL091W 3723 nt1.14□□□□□ -2.23
PEP5P12868 YDL196WYDL196W 330 nt1.14□□□□□ -2.23
PEP5P12868 SPG3YDR504C 384 nt1.13□□□□□ -2.23
PEP5P12868 NUP157YER105C 4176 nt1.12□□□□□ -2.23
PEP5P12868 VAM6YDL077C 3150 nt1.12□□□□□ -2.23
PEP5P12868 YAL067W-AYAL067W-A 228 nt1.11□□□□□ -2.23
PEP5P12868 CMC4YMR194C-B 222 nt1.11□□□□□ -2.23
PEP5P12868 SEC3YER008C 4011 nt1.11□□□□□ -2.23
PEP5P12868 APL1YJR005W 2103 nt1.1□□□□□ -2.23
PEP5P12868 SCC2YDR180W 4482 nt1.1□□□□□ -2.23
PEP5P12868 NOP9YJL010C 2001 nt1.1□□□□□ -2.23
PEP5P12868 PAA1YDR071C 576 nt1.09□□□□□ -2.23
PEP5P12868 ISD11YER048W-A 285 nt1.09□□□□□ -2.23
PEP5P12868 JLP2YMR132C 627 nt1.09□□□□□ -2.23
PEP5P12868 YOR345CYOR345C 351 nt1.09□□□□□ -2.23
PEP5P12868 UBP3YER151C 2739 nt1.09□□□□□ -2.24
PEP5P12868 YFR012W-AYFR012W-A 87 nt1.08□□□□□ -2.24
PEP5P12868 YBR131C-AYBR131C-A 90 nt1.08□□□□□ -2.24
PEP5P12868 ROM2YLR371W 4071 nt1.08□□□□□ -2.24
PEP5P12868 APQ12YIL040W 417 nt1.07□□□□□ -2.24
PEP5P12868 YNL097C-BYNL097C-B 123 nt1.07□□□□□ -2.24
PEP5P12868 YPL044CYPL044C 549 nt1.07□□□□□ -2.24
PEP5P12868 YDL185C-AYDL185C-A 228 nt1.06□□□□□ -2.24
PEP5P12868 ULI1YFR026C 510 nt1.05□□□□□ -2.24
PEP5P12868 BLI1YKL061W 342 nt1.05□□□□□ -2.24
PEP5P12868 RPS30BYOR182C 192 nt1.05□□□□□ -2.24
PEP5P12868 ASE1YOR058C 2658 nt1.04□□□□□ -2.24
PEP5P12868 YIL134C-AYIL134C-A 204 nt1.04□□□□□ -2.24
PEP5P12868 CLU1YMR012W 3834 nt1.03□□□□□ -2.24
PEP5P12868 YMR046W-AYMR046W-A 129 nt1.03□□□□□ -2.24
PEP5P12868 YCR018C-AYCR018C-A 255 nt1.02□□□□□ -2.25
PEP5P12868 tM(CAU)Q1tM(CAU)Q1 76 nt1.02□□□□□ -2.25
PEP5P12868 RPL26BYGR034W 384 nt1.02□□□□□ -2.25
PEP5P12868 PAM16YJL104W 450 nt1.02□□□□□ -2.25
PEP5P12868 COY1YKL179C 2040 nt1.02□□□□□ -2.25
PEP5P12868 KAP120YPL125W 3099 nt1.01□□□□□ -2.25
PEP5P12868 COX12YLR038C 252 nt1.01□□□□□ -2.25
PEP5P12868 YDR406W-AYDR406W-A 246 nt0.99□□□□□ -2.25
PEP5P12868 YGL123C-AYGL123C-A 231 nt0.99□□□□□ -2.25
PEP5P12868 BFR2YDR299W 1605 nt0.99□□□□□ -2.25
PEP5P12868 EMT1tM(CAU)D 73 nt0.98□□□□□ -2.25
PEP5P12868 EMT5tM(CAU)J1 73 nt0.98□□□□□ -2.25
PEP5P12868 EMT3tM(CAU)J2 73 nt0.98□□□□□ -2.25
PEP5P12868 EMT4tM(CAU)M 73 nt0.98□□□□□ -2.25
PEP5P12868 EMT2tM(CAU)O2 73 nt0.98□□□□□ -2.25
PEP5P12868 YOR161W-AYOR161W-A 81 nt0.98□□□□□ -2.25
PEP5P12868 PMP1YCR024C-A 123 nt0.97□□□□□ -2.25
PEP5P12868 YCR038W-AYCR038W-A 126 nt0.97□□□□□ -2.25
PEP5P12868 YLR282CYLR282C 342 nt0.97□□□□□ -2.25
PEP5P12868 HAL9YOL089C 3093 nt0.96□□□□□ -2.26
PEP5P12868 snR190snR190 190 nt0.96□□□□□ -2.26
PEP5P12868 YEL014CYEL014C 306 nt0.95□□□□□ -2.26
PEP5P12868 COX5BYIL111W 456 nt0.95□□□□□ -2.26
PEP5P12868 PAU24YBR301W 363 nt0.95□□□□□ -2.26
PEP5P12868 YER053C-AYER053C-A 114 nt0.94□□□□□ -2.26
PEP5P12868 YIL002W-AYIL002W-A 210 nt0.94□□□□□ -2.26
PEP5P12868 snR46snR46 197 nt0.92□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 30.2 ms