Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CSF1P09603 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CSF1P09603 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CSF1P09603 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.27■□□□□ 0.36
CSF1P09603 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.27■□□□□ 0.36
CSF1P09603 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.27■□□□□ 0.36
CSF1P09603 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.27■□□□□ 0.36
CSF1P09603 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CSF1P09603 CCDC92B-201ENST00000575506 885 ntBASIC17.27■□□□□ 0.36
CSF1P09603 NTF6G-201ENST00000591094 616 ntBASIC17.27■□□□□ 0.36
CSF1P09603 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CSF1P09603 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CSF1P09603 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CSF1P09603 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CSF1P09603 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CSF1P09603 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.27■□□□□ 0.35
CSF1P09603 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.27■□□□□ 0.35
CSF1P09603 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CSF1P09603 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CSF1P09603 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
CSF1P09603 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CSF1P09603 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CSF1P09603 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CSF1P09603 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.27■□□□□ 0.35
CSF1P09603 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSF1P09603 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CSF1P09603 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSF1P09603 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.26■□□□□ 0.35
CSF1P09603 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.26■□□□□ 0.35
CSF1P09603 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.26■□□□□ 0.35
CSF1P09603 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.26■□□□□ 0.35
CSF1P09603 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSF1P09603 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.26■□□□□ 0.35
CSF1P09603 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.26■□□□□ 0.35
CSF1P09603 ID1-201ENST00000376105 1233 ntBASIC17.26■□□□□ 0.35
CSF1P09603 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.26■□□□□ 0.35
CSF1P09603 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.26■□□□□ 0.35
CSF1P09603 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.26■□□□□ 0.35
CSF1P09603 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSF1P09603 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CSF1P09603 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSF1P09603 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
CSF1P09603 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CSF1P09603 LINC02228-203ENST00000641970 1355 ntBASIC17.26■□□□□ 0.35
CSF1P09603 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CSF1P09603 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CSF1P09603 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.25■□□□□ 0.35
CSF1P09603 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CSF1P09603 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSF1P09603 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSF1P09603 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.25■□□□□ 0.35
CSF1P09603 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSF1P09603 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSF1P09603 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSF1P09603 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.25■□□□□ 0.35
CSF1P09603 KRT18P14-201ENST00000534205 1250 ntBASIC17.25■□□□□ 0.35
CSF1P09603 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
CSF1P09603 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CSF1P09603 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CSF1P09603 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CSF1P09603 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.25■□□□□ 0.35
CSF1P09603 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.25■□□□□ 0.35
CSF1P09603 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.25■□□□□ 0.35
CSF1P09603 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.25■□□□□ 0.35
CSF1P09603 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSF1P09603 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSF1P09603 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSF1P09603 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CSF1P09603 AP004607.4-201ENST00000530158 1459 ntBASIC17.24■□□□□ 0.35
CSF1P09603 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSF1P09603 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSF1P09603 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.24■□□□□ 0.35
CSF1P09603 HCG11-201ENST00000411553 5696 ntBASIC17.24■□□□□ 0.35
CSF1P09603 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSF1P09603 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSF1P09603 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.24■□□□□ 0.35
CSF1P09603 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSF1P09603 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.24■□□□□ 0.35
CSF1P09603 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CSF1P09603 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSF1P09603 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CSF1P09603 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CSF1P09603 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSF1P09603 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CSF1P09603 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSF1P09603 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CSF1P09603 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSF1P09603 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSF1P09603 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.24■□□□□ 0.35
CSF1P09603 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSF1P09603 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.24■□□□□ 0.35
CSF1P09603 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSF1P09603 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSF1P09603 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSF1P09603 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.23■□□□□ 0.35
CSF1P09603 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.23■□□□□ 0.35
CSF1P09603 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSF1P09603 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.23■□□□□ 0.35
CSF1P09603 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.23■□□□□ 0.35
CSF1P09603 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms