Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC26.59■■□□□ 1.85
COL5A2P05997 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
COL5A2P05997 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
COL5A2P05997 CALM3-202ENST00000391918 702 ntTSL 2 BASIC26.58■■□□□ 1.85
COL5A2P05997 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
COL5A2P05997 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC26.58■■□□□ 1.85
COL5A2P05997 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
COL5A2P05997 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
COL5A2P05997 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC26.57■■□□□ 1.84
COL5A2P05997 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
COL5A2P05997 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
COL5A2P05997 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
COL5A2P05997 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC26.57■■□□□ 1.84
COL5A2P05997 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
COL5A2P05997 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC26.57■■□□□ 1.84
COL5A2P05997 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC26.57■■□□□ 1.84
COL5A2P05997 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC26.57■■□□□ 1.84
COL5A2P05997 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC26.57■■□□□ 1.84
COL5A2P05997 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC26.57■■□□□ 1.84
COL5A2P05997 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC26.57■■□□□ 1.84
COL5A2P05997 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
COL5A2P05997 KRT8P20-201ENST00000423953 1409 ntBASIC26.57■■□□□ 1.84
COL5A2P05997 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
COL5A2P05997 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
COL5A2P05997 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
COL5A2P05997 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC26.56■■□□□ 1.84
COL5A2P05997 INGX-201ENST00000359239 846 ntBASIC26.56■■□□□ 1.84
COL5A2P05997 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
COL5A2P05997 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
COL5A2P05997 LIN28AP1-201ENST00000429574 405 ntBASIC26.56■■□□□ 1.84
COL5A2P05997 ISCU-203ENST00000431221 799 ntTSL 2 BASIC26.56■■□□□ 1.84
COL5A2P05997 AC063952.2-201ENST00000498792 1227 ntBASIC26.56■■□□□ 1.84
COL5A2P05997 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC26.56■■□□□ 1.84
COL5A2P05997 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
COL5A2P05997 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
COL5A2P05997 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
COL5A2P05997 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC26.56■■□□□ 1.84
COL5A2P05997 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC26.56■■□□□ 1.84
COL5A2P05997 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC26.56■■□□□ 1.84
COL5A2P05997 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
COL5A2P05997 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
COL5A2P05997 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
COL5A2P05997 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC26.55■■□□□ 1.84
COL5A2P05997 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC26.55■■□□□ 1.84
COL5A2P05997 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
COL5A2P05997 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC26.55■■□□□ 1.84
COL5A2P05997 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
COL5A2P05997 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC26.55■■□□□ 1.84
COL5A2P05997 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC26.55■■□□□ 1.84
COL5A2P05997 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC26.55■■□□□ 1.84
COL5A2P05997 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
COL5A2P05997 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
COL5A2P05997 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
COL5A2P05997 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
COL5A2P05997 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
COL5A2P05997 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC26.55■■□□□ 1.84
COL5A2P05997 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC26.55■■□□□ 1.84
COL5A2P05997 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
COL5A2P05997 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
COL5A2P05997 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
COL5A2P05997 AC004980.1-204ENST00000429707 299 ntBASIC26.55■■□□□ 1.84
COL5A2P05997 ATP5G1P1-201ENST00000448724 379 ntBASIC26.55■■□□□ 1.84
COL5A2P05997 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC26.55■■□□□ 1.84
COL5A2P05997 AC011506.1-201ENST00000474329 610 ntBASIC26.55■■□□□ 1.84
COL5A2P05997 NMU-205ENST00000511469 756 ntTSL 3 BASIC26.55■■□□□ 1.84
COL5A2P05997 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC26.55■■□□□ 1.84
COL5A2P05997 AL358472.4-201ENST00000633140 710 ntBASIC26.55■■□□□ 1.84
COL5A2P05997 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
COL5A2P05997 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC26.54■■□□□ 1.84
COL5A2P05997 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
COL5A2P05997 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC26.54■■□□□ 1.84
COL5A2P05997 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC26.54■■□□□ 1.84
COL5A2P05997 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
COL5A2P05997 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC26.54■■□□□ 1.84
COL5A2P05997 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC26.54■■□□□ 1.84
COL5A2P05997 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
COL5A2P05997 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
COL5A2P05997 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
COL5A2P05997 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC26.54■■□□□ 1.84
COL5A2P05997 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC26.54■■□□□ 1.84
COL5A2P05997 GRAMD4P8-201ENST00000605465 1115 ntBASIC26.54■■□□□ 1.84
COL5A2P05997 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
COL5A2P05997 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
COL5A2P05997 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
COL5A2P05997 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
COL5A2P05997 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
COL5A2P05997 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
COL5A2P05997 UPK3BP1-201ENST00000428678 509 ntBASIC26.53■■□□□ 1.84
COL5A2P05997 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
COL5A2P05997 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
COL5A2P05997 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC26.53■■□□□ 1.84
COL5A2P05997 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
COL5A2P05997 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC26.53■■□□□ 1.84
COL5A2P05997 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC26.53■■□□□ 1.84
COL5A2P05997 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC26.52■■□□□ 1.84
COL5A2P05997 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
COL5A2P05997 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC26.52■■□□□ 1.84
COL5A2P05997 AK4P3-201ENST00000418260 669 ntBASIC26.52■■□□□ 1.84
COL5A2P05997 AC117947.1-201ENST00000427448 529 ntBASIC26.52■■□□□ 1.84
COL5A2P05997 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC26.52■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms