Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRAP04437 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TCRAP04437 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC15.22■□□□□ 0.03
TCRAP04437 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TCRAP04437 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRAP04437 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
TCRAP04437 MAG-206ENST00000597035 542 ntTSL 4 BASIC15.22■□□□□ 0.03
TCRAP04437 AL354811.1-201ENST00000610286 706 ntBASIC15.22■□□□□ 0.03
TCRAP04437 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRAP04437 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRAP04437 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRAP04437 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRAP04437 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TCRAP04437 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC15.22■□□□□ 0.03
TCRAP04437 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRAP04437 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
TCRAP04437 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TCRAP04437 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC15.22■□□□□ 0.03
TCRAP04437 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRAP04437 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
TCRAP04437 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC15.22■□□□□ 0.03
TCRAP04437 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRAP04437 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
TCRAP04437 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TCRAP04437 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.21■□□□□ 0.03
TCRAP04437 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC15.21■□□□□ 0.03
TCRAP04437 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TCRAP04437 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TCRAP04437 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TCRAP04437 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TCRAP04437 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TCRAP04437 PWWP2AP1-201ENST00000429776 2273 ntBASIC15.21■□□□□ 0.03
TCRAP04437 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TCRAP04437 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TCRAP04437 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TCRAP04437 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TCRAP04437 NT5C3AP1-201ENST00000394500 1012 ntBASIC15.21■□□□□ 0.03
TCRAP04437 AC010141.2-201ENST00000452426 721 ntBASIC15.21■□□□□ 0.03
TCRAP04437 AP001330.3-201ENST00000520123 633 ntBASIC15.21■□□□□ 0.03
TCRAP04437 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC15.21■□□□□ 0.03
TCRAP04437 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC15.21■□□□□ 0.03
TCRAP04437 FAM21FP-204ENST00000608637 956 ntBASIC15.21■□□□□ 0.03
TCRAP04437 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TCRAP04437 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TCRAP04437 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TCRAP04437 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TCRAP04437 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TCRAP04437 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC15.21■□□□□ 0.03
TCRAP04437 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
TCRAP04437 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TCRAP04437 RASA4CP-201ENST00000424092 1398 ntBASIC15.21■□□□□ 0.02
TCRAP04437 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TCRAP04437 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC15.21■□□□□ 0.02
TCRAP04437 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TCRAP04437 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TCRAP04437 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TCRAP04437 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TCRAP04437 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
TCRAP04437 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TCRAP04437 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TCRAP04437 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC15.2■□□□□ 0.02
TCRAP04437 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC15.2■□□□□ 0.02
TCRAP04437 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TCRAP04437 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TCRAP04437 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TCRAP04437 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
TCRAP04437 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC15.2■□□□□ 0.02
TCRAP04437 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC15.2■□□□□ 0.02
TCRAP04437 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TCRAP04437 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TCRAP04437 EBPL-204ENST00000378272 766 ntTSL 3 BASIC15.2■□□□□ 0.02
TCRAP04437 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC15.2■□□□□ 0.02
TCRAP04437 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TCRAP04437 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TCRAP04437 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC15.2■□□□□ 0.02
TCRAP04437 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TCRAP04437 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC15.2■□□□□ 0.02
TCRAP04437 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TCRAP04437 AL358852.1-201ENST00000623174 1268 ntBASIC15.2■□□□□ 0.02
TCRAP04437 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC15.2■□□□□ 0.02
TCRAP04437 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TCRAP04437 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.2■□□□□ 0.02
TCRAP04437 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TCRAP04437 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TCRAP04437 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TCRAP04437 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TCRAP04437 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TCRAP04437 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.2■□□□□ 0.02
TCRAP04437 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TCRAP04437 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TCRAP04437 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TCRAP04437 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC15.2■□□□□ 0.02
TCRAP04437 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TCRAP04437 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TCRAP04437 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TCRAP04437 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TCRAP04437 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
TCRAP04437 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC15.19■□□□□ 0.02
TCRAP04437 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TCRAP04437 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms