Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GAPDHP04406 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GAPDHP04406 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GAPDHP04406 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.72■□□□□ 0.27
GAPDHP04406 AC091799.1-201ENST00000422823 811 ntBASIC16.72■□□□□ 0.27
GAPDHP04406 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GAPDHP04406 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.72■□□□□ 0.27
GAPDHP04406 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.72■□□□□ 0.27
GAPDHP04406 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
GAPDHP04406 BID-214ENST00000617586 542 ntTSL 5 BASIC16.72■□□□□ 0.27
GAPDHP04406 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GAPDHP04406 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GAPDHP04406 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GAPDHP04406 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GAPDHP04406 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
GAPDHP04406 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GAPDHP04406 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.72■□□□□ 0.27
GAPDHP04406 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GAPDHP04406 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.71■□□□□ 0.27
GAPDHP04406 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GAPDHP04406 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GAPDHP04406 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GAPDHP04406 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.71■□□□□ 0.27
GAPDHP04406 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GAPDHP04406 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GAPDHP04406 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GAPDHP04406 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.71■□□□□ 0.27
GAPDHP04406 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
GAPDHP04406 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GAPDHP04406 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
GAPDHP04406 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.71■□□□□ 0.27
GAPDHP04406 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.71■□□□□ 0.27
GAPDHP04406 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
GAPDHP04406 AC011767.1-201ENST00000617410 1153 ntBASIC16.71■□□□□ 0.27
GAPDHP04406 AC013268.1-206ENST00000638368 961 ntBASIC16.71■□□□□ 0.27
GAPDHP04406 AC112229.1-201ENST00000639295 961 ntBASIC16.71■□□□□ 0.27
GAPDHP04406 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GAPDHP04406 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
GAPDHP04406 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GAPDHP04406 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GAPDHP04406 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
GAPDHP04406 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GAPDHP04406 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
GAPDHP04406 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
GAPDHP04406 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
GAPDHP04406 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.71■□□□□ 0.27
GAPDHP04406 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.71■□□□□ 0.26
GAPDHP04406 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.71■□□□□ 0.26
GAPDHP04406 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.71■□□□□ 0.26
GAPDHP04406 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GAPDHP04406 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GAPDHP04406 AIRN-201ENST00000601203 4374 ntBASIC16.7■□□□□ 0.26
GAPDHP04406 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
GAPDHP04406 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GAPDHP04406 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
GAPDHP04406 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GAPDHP04406 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GAPDHP04406 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GAPDHP04406 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.7■□□□□ 0.26
GAPDHP04406 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
GAPDHP04406 AC007322.3-201ENST00000426526 701 ntBASIC16.7■□□□□ 0.26
GAPDHP04406 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.7■□□□□ 0.26
GAPDHP04406 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.7■□□□□ 0.26
GAPDHP04406 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.7■□□□□ 0.26
GAPDHP04406 MFSD11-216ENST00000590393 1141 ntBASIC16.7■□□□□ 0.26
GAPDHP04406 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
GAPDHP04406 AL591742.1-201ENST00000604433 565 ntBASIC16.7■□□□□ 0.26
GAPDHP04406 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GAPDHP04406 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GAPDHP04406 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
GAPDHP04406 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GAPDHP04406 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GAPDHP04406 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
GAPDHP04406 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
GAPDHP04406 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.7■□□□□ 0.26
GAPDHP04406 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
GAPDHP04406 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GAPDHP04406 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.69■□□□□ 0.26
GAPDHP04406 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GAPDHP04406 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GAPDHP04406 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
GAPDHP04406 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GAPDHP04406 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
GAPDHP04406 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.69■□□□□ 0.26
GAPDHP04406 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GAPDHP04406 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GAPDHP04406 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.69■□□□□ 0.26
GAPDHP04406 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.69■□□□□ 0.26
GAPDHP04406 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GAPDHP04406 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
GAPDHP04406 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GAPDHP04406 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
GAPDHP04406 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.69■□□□□ 0.26
GAPDHP04406 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GAPDHP04406 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.69■□□□□ 0.26
GAPDHP04406 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.69■□□□□ 0.26
GAPDHP04406 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.69■□□□□ 0.26
GAPDHP04406 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.69■□□□□ 0.26
GAPDHP04406 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
GAPDHP04406 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms