Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.87■□□□□ 0.13
IFNA1P01562 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
IFNA1P01562 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IFNA1P01562 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
IFNA1P01562 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IFNA1P01562 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
IFNA1P01562 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IFNA1P01562 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IFNA1P01562 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.86■□□□□ 0.13
IFNA1P01562 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC15.86■□□□□ 0.13
IFNA1P01562 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC15.86■□□□□ 0.13
IFNA1P01562 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IFNA1P01562 BX005040.4-201ENST00000637145 1518 ntBASIC15.86■□□□□ 0.13
IFNA1P01562 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC15.86■□□□□ 0.13
IFNA1P01562 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IFNA1P01562 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC15.86■□□□□ 0.13
IFNA1P01562 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC15.86■□□□□ 0.13
IFNA1P01562 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
IFNA1P01562 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
IFNA1P01562 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IFNA1P01562 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IFNA1P01562 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
IFNA1P01562 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
IFNA1P01562 AC021242.3-201ENST00000607598 1377 ntBASIC15.86■□□□□ 0.13
IFNA1P01562 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
IFNA1P01562 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IFNA1P01562 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IFNA1P01562 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC15.85■□□□□ 0.13
IFNA1P01562 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IFNA1P01562 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IFNA1P01562 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IFNA1P01562 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
IFNA1P01562 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
IFNA1P01562 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IFNA1P01562 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
IFNA1P01562 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
IFNA1P01562 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IFNA1P01562 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
IFNA1P01562 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IFNA1P01562 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
IFNA1P01562 RARRES2P2-201ENST00000394842 485 ntBASIC15.85■□□□□ 0.13
IFNA1P01562 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
IFNA1P01562 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC15.85■□□□□ 0.13
IFNA1P01562 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
IFNA1P01562 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC15.85■□□□□ 0.13
IFNA1P01562 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
IFNA1P01562 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.85■□□□□ 0.13
IFNA1P01562 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
IFNA1P01562 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IFNA1P01562 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IFNA1P01562 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
IFNA1P01562 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
IFNA1P01562 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
IFNA1P01562 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IFNA1P01562 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IFNA1P01562 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
IFNA1P01562 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
IFNA1P01562 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
IFNA1P01562 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
IFNA1P01562 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
IFNA1P01562 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
IFNA1P01562 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
IFNA1P01562 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IFNA1P01562 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC15.84■□□□□ 0.13
IFNA1P01562 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IFNA1P01562 TFPT-201ENST00000391757 774 ntTSL 5 BASIC15.84■□□□□ 0.13
IFNA1P01562 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
IFNA1P01562 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
IFNA1P01562 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
IFNA1P01562 MBP-237ENST00000579129 1052 ntTSL 5 BASIC15.84■□□□□ 0.13
IFNA1P01562 MTDHP2-201ENST00000601468 714 ntBASIC15.84■□□□□ 0.13
IFNA1P01562 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC15.84■□□□□ 0.13
IFNA1P01562 AL117332.1-201ENST00000622628 974 ntBASIC15.84■□□□□ 0.13
IFNA1P01562 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
IFNA1P01562 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IFNA1P01562 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
IFNA1P01562 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IFNA1P01562 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.84■□□□□ 0.13
IFNA1P01562 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IFNA1P01562 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IFNA1P01562 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IFNA1P01562 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
IFNA1P01562 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IFNA1P01562 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
IFNA1P01562 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
IFNA1P01562 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
IFNA1P01562 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
IFNA1P01562 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC15.84■□□□□ 0.13
IFNA1P01562 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.13
IFNA1P01562 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
IFNA1P01562 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
IFNA1P01562 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC15.83■□□□□ 0.12
IFNA1P01562 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IFNA1P01562 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC15.83■□□□□ 0.12
IFNA1P01562 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IFNA1P01562 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
IFNA1P01562 CD72-202ENST00000378430 585 ntTSL 3 BASIC15.83■□□□□ 0.12
IFNA1P01562 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
IFNA1P01562 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
IFNA1P01562 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms