Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SNCGO76070 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC13.51□□□□□ -0.25
SNCGO76070 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNCGO76070 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SNCGO76070 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC13.51□□□□□ -0.25
SNCGO76070 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNCGO76070 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNCGO76070 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNCGO76070 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.51□□□□□ -0.25
SNCGO76070 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNCGO76070 ADK-206ENST00000541550 2222 ntTSL 2 BASIC13.51□□□□□ -0.25
SNCGO76070 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNCGO76070 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNCGO76070 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNCGO76070 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNCGO76070 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SNCGO76070 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNCGO76070 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SNCGO76070 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNCGO76070 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNCGO76070 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SNCGO76070 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNCGO76070 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC13.5□□□□□ -0.25
SNCGO76070 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNCGO76070 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNCGO76070 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNCGO76070 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC13.5□□□□□ -0.25
SNCGO76070 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNCGO76070 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNCGO76070 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
SNCGO76070 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SNCGO76070 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SNCGO76070 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
SNCGO76070 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNCGO76070 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC13.5□□□□□ -0.25
SNCGO76070 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNCGO76070 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC13.5□□□□□ -0.25
SNCGO76070 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC13.5□□□□□ -0.25
SNCGO76070 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC13.5□□□□□ -0.25
SNCGO76070 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
SNCGO76070 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNCGO76070 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNCGO76070 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC13.5□□□□□ -0.25
SNCGO76070 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SNCGO76070 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNCGO76070 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNCGO76070 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNCGO76070 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNCGO76070 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC13.49□□□□□ -0.25
SNCGO76070 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SNCGO76070 C17orf82-201ENST00000623772 1530 ntBASIC13.49□□□□□ -0.25
SNCGO76070 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNCGO76070 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SNCGO76070 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC13.49□□□□□ -0.25
SNCGO76070 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNCGO76070 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNCGO76070 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
SNCGO76070 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
SNCGO76070 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SNCGO76070 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC13.49□□□□□ -0.25
SNCGO76070 AL049796.1-201ENST00000565336 1766 ntBASIC13.49□□□□□ -0.25
SNCGO76070 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
SNCGO76070 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNCGO76070 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
SNCGO76070 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNCGO76070 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SNCGO76070 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SNCGO76070 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNCGO76070 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNCGO76070 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNCGO76070 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
SNCGO76070 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SNCGO76070 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNCGO76070 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNCGO76070 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC13.49□□□□□ -0.25
SNCGO76070 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SNCGO76070 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNCGO76070 AP000997.3-201ENST00000623333 2250 ntBASIC13.48□□□□□ -0.25
SNCGO76070 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNCGO76070 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNCGO76070 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNCGO76070 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNCGO76070 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
SNCGO76070 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNCGO76070 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNCGO76070 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNCGO76070 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
SNCGO76070 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SNCGO76070 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNCGO76070 CEP120-209ENST00000515110 606 ntTSL 3 BASIC13.48□□□□□ -0.25
SNCGO76070 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC13.48□□□□□ -0.25
SNCGO76070 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNCGO76070 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNCGO76070 AL049812.1-201ENST00000432563 2267 ntBASIC13.48□□□□□ -0.25
SNCGO76070 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNCGO76070 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
SNCGO76070 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SNCGO76070 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SNCGO76070 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC13.48□□□□□ -0.25
SNCGO76070 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms