Protein–RNA interactions for Protein: O76009

KRT33A, Keratin, type I cuticular Ha3-I, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT33AO76009 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
KRT33AO76009 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KRT33AO76009 AL391422.3-201ENST00000603791 2761 ntBASIC18.12■□□□□ 0.49
KRT33AO76009 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.12■□□□□ 0.49
KRT33AO76009 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.12■□□□□ 0.49
KRT33AO76009 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.12■□□□□ 0.49
KRT33AO76009 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KRT33AO76009 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.12■□□□□ 0.49
KRT33AO76009 AC083906.2-201ENST00000511578 360 ntBASIC18.12■□□□□ 0.49
KRT33AO76009 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT33AO76009 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.12■□□□□ 0.49
KRT33AO76009 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KRT33AO76009 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.12■□□□□ 0.49
KRT33AO76009 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
KRT33AO76009 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KRT33AO76009 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
KRT33AO76009 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.12■□□□□ 0.49
KRT33AO76009 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT33AO76009 MKRN4P-201ENST00000444706 1521 ntBASIC18.12■□□□□ 0.49
KRT33AO76009 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.12■□□□□ 0.49
KRT33AO76009 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.12■□□□□ 0.49
KRT33AO76009 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
KRT33AO76009 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
KRT33AO76009 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
KRT33AO76009 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT33AO76009 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT33AO76009 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
KRT33AO76009 MCRIP2P1-201ENST00000394346 511 ntBASIC18.11■□□□□ 0.49
KRT33AO76009 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.11■□□□□ 0.49
KRT33AO76009 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KRT33AO76009 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.11■□□□□ 0.49
KRT33AO76009 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.11■□□□□ 0.49
KRT33AO76009 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.11■□□□□ 0.49
KRT33AO76009 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT33AO76009 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
KRT33AO76009 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT33AO76009 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT33AO76009 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KRT33AO76009 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KRT33AO76009 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT33AO76009 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.11■□□□□ 0.49
KRT33AO76009 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT33AO76009 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.11■□□□□ 0.49
KRT33AO76009 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT33AO76009 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
KRT33AO76009 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.1■□□□□ 0.49
KRT33AO76009 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
KRT33AO76009 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
KRT33AO76009 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.1■□□□□ 0.49
KRT33AO76009 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT33AO76009 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
KRT33AO76009 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
KRT33AO76009 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KRT33AO76009 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT33AO76009 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.1■□□□□ 0.49
KRT33AO76009 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.1■□□□□ 0.49
KRT33AO76009 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT33AO76009 AL512625.2-201ENST00000417533 625 ntBASIC18.1■□□□□ 0.49
KRT33AO76009 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.1■□□□□ 0.49
KRT33AO76009 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.1■□□□□ 0.49
KRT33AO76009 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
KRT33AO76009 AL050303.2-201ENST00000619798 666 ntBASIC18.1■□□□□ 0.49
KRT33AO76009 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.1■□□□□ 0.49
KRT33AO76009 AFG3L1P-217ENST00000557444 2447 ntBASIC18.1■□□□□ 0.49
KRT33AO76009 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.1■□□□□ 0.49
KRT33AO76009 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT33AO76009 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.09■□□□□ 0.49
KRT33AO76009 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.09■□□□□ 0.49
KRT33AO76009 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.09■□□□□ 0.49
KRT33AO76009 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.09■□□□□ 0.49
KRT33AO76009 NCF1B-203ENST00000435988 1254 ntBASIC18.09■□□□□ 0.49
KRT33AO76009 AC093787.1-201ENST00000450396 207 ntBASIC18.09■□□□□ 0.49
KRT33AO76009 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.09■□□□□ 0.49
KRT33AO76009 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KRT33AO76009 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT33AO76009 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.09■□□□□ 0.49
KRT33AO76009 AC100791.3-201ENST00000617619 330 ntBASIC18.09■□□□□ 0.49
KRT33AO76009 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT33AO76009 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT33AO76009 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.09■□□□□ 0.49
KRT33AO76009 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT33AO76009 FP700111.2-201ENST00000619190 1892 ntBASIC18.09■□□□□ 0.49
KRT33AO76009 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.09■□□□□ 0.49
KRT33AO76009 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
KRT33AO76009 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KRT33AO76009 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.09■□□□□ 0.49
KRT33AO76009 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT33AO76009 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT33AO76009 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT33AO76009 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT33AO76009 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
KRT33AO76009 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
KRT33AO76009 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
KRT33AO76009 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
KRT33AO76009 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
KRT33AO76009 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
KRT33AO76009 AC010980.2-201ENST00000587099 1412 ntBASIC18.08■□□□□ 0.49
KRT33AO76009 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
KRT33AO76009 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.08■□□□□ 0.49
KRT33AO76009 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms