Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF2O60811 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF2O60811 DPP3P2-201ENST00000416030 1696 ntBASIC18.79■□□□□ 0.6
PRAMEF2O60811 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.79■□□□□ 0.6
PRAMEF2O60811 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF2O60811 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.79■□□□□ 0.6
PRAMEF2O60811 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.79■□□□□ 0.6
PRAMEF2O60811 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF2O60811 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF2O60811 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF2O60811 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.79■□□□□ 0.6
PRAMEF2O60811 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PRAMEF2O60811 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.79■□□□□ 0.6
PRAMEF2O60811 PNMA6B-201ENST00000538162 1200 ntBASIC18.79■□□□□ 0.6
PRAMEF2O60811 C2orf69P4-201ENST00000565394 541 ntBASIC18.79■□□□□ 0.6
PRAMEF2O60811 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.79■□□□□ 0.6
PRAMEF2O60811 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF2O60811 AC092368.3-202ENST00000574180 1591 ntBASIC18.79■□□□□ 0.6
PRAMEF2O60811 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PRAMEF2O60811 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF2O60811 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.78■□□□□ 0.6
PRAMEF2O60811 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF2O60811 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF2O60811 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PRAMEF2O60811 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PRAMEF2O60811 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF2O60811 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.78■□□□□ 0.6
PRAMEF2O60811 AC092667.1-201ENST00000434301 2586 ntBASIC18.78■□□□□ 0.6
PRAMEF2O60811 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF2O60811 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
PRAMEF2O60811 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PRAMEF2O60811 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.78■□□□□ 0.6
PRAMEF2O60811 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF2O60811 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF2O60811 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.78■□□□□ 0.6
PRAMEF2O60811 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF2O60811 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.78■□□□□ 0.6
PRAMEF2O60811 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF2O60811 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF2O60811 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF2O60811 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.77■□□□□ 0.6
PRAMEF2O60811 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF2O60811 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.77■□□□□ 0.6
PRAMEF2O60811 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF2O60811 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF2O60811 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF2O60811 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.77■□□□□ 0.6
PRAMEF2O60811 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF2O60811 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF2O60811 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF2O60811 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF2O60811 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PRAMEF2O60811 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.77■□□□□ 0.6
PRAMEF2O60811 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.77■□□□□ 0.6
PRAMEF2O60811 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.77■□□□□ 0.6
PRAMEF2O60811 AC008403.3-201ENST00000598924 454 ntBASIC18.77■□□□□ 0.6
PRAMEF2O60811 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF2O60811 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.77■□□□□ 0.6
PRAMEF2O60811 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF2O60811 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.77■□□□□ 0.6
PRAMEF2O60811 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
PRAMEF2O60811 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PRAMEF2O60811 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.76■□□□□ 0.59
PRAMEF2O60811 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF2O60811 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.76■□□□□ 0.59
PRAMEF2O60811 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF2O60811 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PRAMEF2O60811 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.76■□□□□ 0.59
PRAMEF2O60811 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
PRAMEF2O60811 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.76■□□□□ 0.59
PRAMEF2O60811 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.76■□□□□ 0.59
PRAMEF2O60811 UNC93B4-201ENST00000505679 747 ntBASIC18.76■□□□□ 0.59
PRAMEF2O60811 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF2O60811 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PRAMEF2O60811 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF2O60811 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF2O60811 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PRAMEF2O60811 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF2O60811 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.76■□□□□ 0.59
PRAMEF2O60811 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF2O60811 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEF2O60811 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
PRAMEF2O60811 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.75■□□□□ 0.59
PRAMEF2O60811 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF2O60811 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF2O60811 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF2O60811 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF2O60811 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF2O60811 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF2O60811 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF2O60811 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.75■□□□□ 0.59
PRAMEF2O60811 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF2O60811 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF2O60811 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF2O60811 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF2O60811 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.75■□□□□ 0.59
PRAMEF2O60811 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF2O60811 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEF2O60811 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PRAMEF2O60811 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms