Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
PHF1O43189 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.25■□□□□ 0.35
PHF1O43189 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PHF1O43189 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHF1O43189 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHF1O43189 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHF1O43189 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHF1O43189 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PHF1O43189 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PHF1O43189 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.25■□□□□ 0.35
PHF1O43189 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PHF1O43189 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PHF1O43189 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PHF1O43189 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PHF1O43189 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PHF1O43189 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PHF1O43189 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PHF1O43189 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PHF1O43189 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.24■□□□□ 0.35
PHF1O43189 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
PHF1O43189 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PHF1O43189 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.24■□□□□ 0.35
PHF1O43189 ECEL1P3-201ENST00000427961 737 ntBASIC17.24■□□□□ 0.35
PHF1O43189 AC097658.1-201ENST00000475555 843 ntBASIC17.24■□□□□ 0.35
PHF1O43189 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.24■□□□□ 0.35
PHF1O43189 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.24■□□□□ 0.35
PHF1O43189 OR10C1-204ENST00000622521 1039 ntBASIC17.24■□□□□ 0.35
PHF1O43189 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
PHF1O43189 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.24■□□□□ 0.35
PHF1O43189 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PHF1O43189 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PHF1O43189 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PHF1O43189 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PHF1O43189 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.24■□□□□ 0.35
PHF1O43189 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PHF1O43189 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PHF1O43189 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.24■□□□□ 0.35
PHF1O43189 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PHF1O43189 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PHF1O43189 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PHF1O43189 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
PHF1O43189 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PHF1O43189 BX276092.2-201ENST00000417668 665 ntBASIC17.23■□□□□ 0.35
PHF1O43189 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.23■□□□□ 0.35
PHF1O43189 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PHF1O43189 FAM210CP-201ENST00000445714 574 ntBASIC17.23■□□□□ 0.35
PHF1O43189 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.23■□□□□ 0.35
PHF1O43189 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.23■□□□□ 0.35
PHF1O43189 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PHF1O43189 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.23■□□□□ 0.35
PHF1O43189 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PHF1O43189 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PHF1O43189 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PHF1O43189 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.22■□□□□ 0.35
PHF1O43189 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHF1O43189 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PHF1O43189 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHF1O43189 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHF1O43189 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
PHF1O43189 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.22■□□□□ 0.35
PHF1O43189 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHF1O43189 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHF1O43189 AC091799.1-201ENST00000422823 811 ntBASIC17.22■□□□□ 0.35
PHF1O43189 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHF1O43189 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHF1O43189 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.22■□□□□ 0.35
PHF1O43189 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.22■□□□□ 0.35
PHF1O43189 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.22■□□□□ 0.35
PHF1O43189 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.22■□□□□ 0.35
PHF1O43189 AC010331.1-201ENST00000611423 582 ntBASIC17.22■□□□□ 0.35
PHF1O43189 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
PHF1O43189 AFG3L1P-217ENST00000557444 2447 ntBASIC17.22■□□□□ 0.35
PHF1O43189 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
PHF1O43189 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
PHF1O43189 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.22■□□□□ 0.35
PHF1O43189 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PHF1O43189 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHF1O43189 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PHF1O43189 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PHF1O43189 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PHF1O43189 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PHF1O43189 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
PHF1O43189 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PHF1O43189 AC121338.2-201ENST00000622535 1744 ntBASIC17.21■□□□□ 0.35
PHF1O43189 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PHF1O43189 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PHF1O43189 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.21■□□□□ 0.35
PHF1O43189 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PHF1O43189 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PHF1O43189 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PHF1O43189 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PHF1O43189 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PHF1O43189 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PHF1O43189 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PHF1O43189 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
PHF1O43189 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PHF1O43189 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.21■□□□□ 0.35
PHF1O43189 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.21■□□□□ 0.35
PHF1O43189 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
PHF1O43189 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms