Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHGDHO43175 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
PHGDHO43175 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHGDHO43175 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHGDHO43175 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHGDHO43175 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHGDHO43175 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.91■□□□□ 0.78
PHGDHO43175 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PHGDHO43175 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHGDHO43175 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.91■□□□□ 0.78
PHGDHO43175 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.91■□□□□ 0.78
PHGDHO43175 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.91■□□□□ 0.78
PHGDHO43175 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PHGDHO43175 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHGDHO43175 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHGDHO43175 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHGDHO43175 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.91■□□□□ 0.78
PHGDHO43175 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHGDHO43175 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHGDHO43175 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
PHGDHO43175 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
PHGDHO43175 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHGDHO43175 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHGDHO43175 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PHGDHO43175 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHGDHO43175 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
PHGDHO43175 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PHGDHO43175 AL162412.1-201ENST00000567129 965 ntBASIC19.9■□□□□ 0.78
PHGDHO43175 AC011767.1-201ENST00000617410 1153 ntBASIC19.9■□□□□ 0.78
PHGDHO43175 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHGDHO43175 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PHGDHO43175 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.9■□□□□ 0.78
PHGDHO43175 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PHGDHO43175 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.9■□□□□ 0.78
PHGDHO43175 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.9■□□□□ 0.78
PHGDHO43175 AC116562.4-201ENST00000641316 2276 ntBASIC19.9■□□□□ 0.78
PHGDHO43175 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
PHGDHO43175 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PHGDHO43175 AC016769.1-201ENST00000409132 1010 ntBASIC19.89■□□□□ 0.77
PHGDHO43175 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.89■□□□□ 0.77
PHGDHO43175 CNN2P6-201ENST00000439038 900 ntBASIC19.89■□□□□ 0.77
PHGDHO43175 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PHGDHO43175 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.89■□□□□ 0.77
PHGDHO43175 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.89■□□□□ 0.77
PHGDHO43175 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PHGDHO43175 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.89■□□□□ 0.77
PHGDHO43175 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PHGDHO43175 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.89■□□□□ 0.77
PHGDHO43175 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.89■□□□□ 0.77
PHGDHO43175 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.89■□□□□ 0.77
PHGDHO43175 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PHGDHO43175 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PHGDHO43175 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
PHGDHO43175 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.88■□□□□ 0.77
PHGDHO43175 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHGDHO43175 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PHGDHO43175 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHGDHO43175 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHGDHO43175 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.88■□□□□ 0.77
PHGDHO43175 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHGDHO43175 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHGDHO43175 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PHGDHO43175 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHGDHO43175 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHGDHO43175 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.88■□□□□ 0.77
PHGDHO43175 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PHGDHO43175 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PHGDHO43175 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
PHGDHO43175 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.88■□□□□ 0.77
PHGDHO43175 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.88■□□□□ 0.77
PHGDHO43175 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.88■□□□□ 0.77
PHGDHO43175 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PHGDHO43175 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.88■□□□□ 0.77
PHGDHO43175 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PHGDHO43175 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.88■□□□□ 0.77
PHGDHO43175 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.88■□□□□ 0.77
PHGDHO43175 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.88■□□□□ 0.77
PHGDHO43175 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.88■□□□□ 0.77
PHGDHO43175 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.88■□□□□ 0.77
PHGDHO43175 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHGDHO43175 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.87■□□□□ 0.77
PHGDHO43175 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHGDHO43175 TMEM179-206ENST00000616017 1645 ntBASIC19.87■□□□□ 0.77
PHGDHO43175 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHGDHO43175 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
PHGDHO43175 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHGDHO43175 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PHGDHO43175 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHGDHO43175 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHGDHO43175 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PHGDHO43175 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PHGDHO43175 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.87■□□□□ 0.77
PHGDHO43175 AC026271.2-201ENST00000428091 497 ntBASIC19.87■□□□□ 0.77
PHGDHO43175 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.87■□□□□ 0.77
PHGDHO43175 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.87■□□□□ 0.77
PHGDHO43175 RARRES2P4-201ENST00000514074 484 ntBASIC19.87■□□□□ 0.77
PHGDHO43175 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.87■□□□□ 0.77
PHGDHO43175 DUX4L16-201ENST00000555130 1264 ntBASIC19.87■□□□□ 0.77
PHGDHO43175 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.87■□□□□ 0.77
PHGDHO43175 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms