Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.44■□□□□ 0.7
UBFD1O14562 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBFD1O14562 AC005332.7-201ENST00000614046 2005 ntBASIC19.44■□□□□ 0.7
UBFD1O14562 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.44■□□□□ 0.7
UBFD1O14562 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBFD1O14562 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBFD1O14562 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBFD1O14562 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.43■□□□□ 0.7
UBFD1O14562 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBFD1O14562 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBFD1O14562 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBFD1O14562 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.43■□□□□ 0.7
UBFD1O14562 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
UBFD1O14562 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBFD1O14562 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBFD1O14562 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBFD1O14562 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBFD1O14562 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
UBFD1O14562 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBFD1O14562 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.43■□□□□ 0.7
UBFD1O14562 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBFD1O14562 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.43■□□□□ 0.7
UBFD1O14562 CNN2P6-201ENST00000439038 900 ntBASIC19.43■□□□□ 0.7
UBFD1O14562 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.43■□□□□ 0.7
UBFD1O14562 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
UBFD1O14562 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.43■□□□□ 0.7
UBFD1O14562 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBFD1O14562 MIR6821-201ENST00000617625 74 ntBASIC19.43■□□□□ 0.7
UBFD1O14562 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBFD1O14562 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBFD1O14562 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBFD1O14562 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBFD1O14562 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBFD1O14562 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.43■□□□□ 0.7
UBFD1O14562 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBFD1O14562 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBFD1O14562 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.42■□□□□ 0.7
UBFD1O14562 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.42■□□□□ 0.7
UBFD1O14562 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBFD1O14562 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBFD1O14562 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.42■□□□□ 0.7
UBFD1O14562 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.42■□□□□ 0.7
UBFD1O14562 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.42■□□□□ 0.7
UBFD1O14562 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.42■□□□□ 0.7
UBFD1O14562 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.42■□□□□ 0.7
UBFD1O14562 AC018445.3-201ENST00000624177 1945 ntBASIC19.42■□□□□ 0.7
UBFD1O14562 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBFD1O14562 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBFD1O14562 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBFD1O14562 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
UBFD1O14562 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBFD1O14562 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBFD1O14562 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBFD1O14562 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBFD1O14562 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBFD1O14562 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
UBFD1O14562 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBFD1O14562 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBFD1O14562 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.41■□□□□ 0.7
UBFD1O14562 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.41■□□□□ 0.7
UBFD1O14562 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.41■□□□□ 0.7
UBFD1O14562 RARRES2P4-201ENST00000514074 484 ntBASIC19.41■□□□□ 0.7
UBFD1O14562 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.41■□□□□ 0.7
UBFD1O14562 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBFD1O14562 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBFD1O14562 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBFD1O14562 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBFD1O14562 KRT8P17-201ENST00000453110 1448 ntBASIC19.41■□□□□ 0.7
UBFD1O14562 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.41■□□□□ 0.7
UBFD1O14562 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBFD1O14562 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBFD1O14562 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBFD1O14562 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBFD1O14562 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.4■□□□□ 0.7
UBFD1O14562 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
UBFD1O14562 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
UBFD1O14562 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBFD1O14562 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.4■□□□□ 0.7
UBFD1O14562 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBFD1O14562 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBFD1O14562 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.4■□□□□ 0.7
UBFD1O14562 KRT18P5-201ENST00000436075 1291 ntBASIC19.4■□□□□ 0.7
UBFD1O14562 DUX4L16-201ENST00000555130 1264 ntBASIC19.4■□□□□ 0.7
UBFD1O14562 AC137761.2-201ENST00000561729 223 ntBASIC19.4■□□□□ 0.7
UBFD1O14562 AC145350.3-201ENST00000569033 163 ntBASIC19.4■□□□□ 0.7
UBFD1O14562 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.4■□□□□ 0.7
UBFD1O14562 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.4■□□□□ 0.7
UBFD1O14562 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBFD1O14562 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.4■□□□□ 0.7
UBFD1O14562 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBFD1O14562 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
UBFD1O14562 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBFD1O14562 AC068338.2-201ENST00000563278 1430 ntBASIC19.4■□□□□ 0.7
UBFD1O14562 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBFD1O14562 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.4■□□□□ 0.7
UBFD1O14562 AC009237.14-201ENST00000609975 1594 ntBASIC19.4■□□□□ 0.7
UBFD1O14562 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
UBFD1O14562 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
UBFD1O14562 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
UBFD1O14562 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms