Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC28A1O00337 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC28A1O00337 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC28A1O00337 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.29■□□□□ 0.68
SLC28A1O00337 MCRIP2P1-201ENST00000394346 511 ntBASIC19.29■□□□□ 0.68
SLC28A1O00337 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC28A1O00337 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC28A1O00337 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC28A1O00337 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SLC28A1O00337 AC087623.3-201ENST00000607047 1098 ntBASIC19.29■□□□□ 0.68
SLC28A1O00337 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.29■□□□□ 0.68
SLC28A1O00337 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC28A1O00337 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC28A1O00337 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.29■□□□□ 0.68
SLC28A1O00337 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC28A1O00337 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC28A1O00337 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.29■□□□□ 0.68
SLC28A1O00337 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
SLC28A1O00337 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SLC28A1O00337 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC28A1O00337 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC28A1O00337 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC28A1O00337 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SLC28A1O00337 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC28A1O00337 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC28A1O00337 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SLC28A1O00337 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC28A1O00337 RARRES2P4-201ENST00000514074 484 ntBASIC19.28■□□□□ 0.68
SLC28A1O00337 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.28■□□□□ 0.68
SLC28A1O00337 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SLC28A1O00337 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC28A1O00337 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC28A1O00337 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.28■□□□□ 0.68
SLC28A1O00337 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC28A1O00337 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC28A1O00337 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC28A1O00337 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
SLC28A1O00337 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC28A1O00337 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC28A1O00337 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SLC28A1O00337 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
SLC28A1O00337 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC28A1O00337 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SLC28A1O00337 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SLC28A1O00337 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC28A1O00337 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC28A1O00337 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC28A1O00337 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC28A1O00337 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC28A1O00337 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC28A1O00337 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC28A1O00337 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC28A1O00337 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SLC28A1O00337 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
SLC28A1O00337 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC28A1O00337 AC016769.1-201ENST00000409132 1010 ntBASIC19.27■□□□□ 0.68
SLC28A1O00337 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.27■□□□□ 0.68
SLC28A1O00337 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC28A1O00337 MFSD11-216ENST00000590393 1141 ntBASIC19.27■□□□□ 0.68
SLC28A1O00337 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC28A1O00337 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SLC28A1O00337 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC28A1O00337 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.27■□□□□ 0.68
SLC28A1O00337 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SLC28A1O00337 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SLC28A1O00337 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.27■□□□□ 0.67
SLC28A1O00337 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
SLC28A1O00337 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC28A1O00337 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC28A1O00337 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC28A1O00337 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.26■□□□□ 0.67
SLC28A1O00337 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.26■□□□□ 0.67
SLC28A1O00337 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC28A1O00337 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC28A1O00337 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC28A1O00337 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.26■□□□□ 0.67
SLC28A1O00337 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SLC28A1O00337 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC28A1O00337 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SLC28A1O00337 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.26■□□□□ 0.67
SLC28A1O00337 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC28A1O00337 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC28A1O00337 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC28A1O00337 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC28A1O00337 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.26■□□□□ 0.67
SLC28A1O00337 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC28A1O00337 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC28A1O00337 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC28A1O00337 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC28A1O00337 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC28A1O00337 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC28A1O00337 KRT18P5-201ENST00000436075 1291 ntBASIC19.25■□□□□ 0.67
SLC28A1O00337 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.25■□□□□ 0.67
SLC28A1O00337 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC28A1O00337 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC28A1O00337 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.25■□□□□ 0.67
SLC28A1O00337 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC28A1O00337 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SLC28A1O00337 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC28A1O00337 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms