Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.67■□□□□ 0.74
C4orf47A7E2U8 UPK3BP1-201ENST00000428678 509 ntBASIC19.67■□□□□ 0.74
C4orf47A7E2U8 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
C4orf47A7E2U8 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.67■□□□□ 0.74
C4orf47A7E2U8 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.67■□□□□ 0.74
C4orf47A7E2U8 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.67■□□□□ 0.74
C4orf47A7E2U8 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.67■□□□□ 0.74
C4orf47A7E2U8 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.67■□□□□ 0.74
C4orf47A7E2U8 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.67■□□□□ 0.74
C4orf47A7E2U8 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.67■□□□□ 0.74
C4orf47A7E2U8 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
C4orf47A7E2U8 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
C4orf47A7E2U8 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
C4orf47A7E2U8 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.66■□□□□ 0.74
C4orf47A7E2U8 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
C4orf47A7E2U8 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.66■□□□□ 0.74
C4orf47A7E2U8 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
C4orf47A7E2U8 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.66■□□□□ 0.74
C4orf47A7E2U8 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
C4orf47A7E2U8 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.66■□□□□ 0.74
C4orf47A7E2U8 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.66■□□□□ 0.74
C4orf47A7E2U8 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.66■□□□□ 0.74
C4orf47A7E2U8 AL121906.2-201ENST00000621597 723 ntBASIC19.66■□□□□ 0.74
C4orf47A7E2U8 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.66■□□□□ 0.74
C4orf47A7E2U8 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
C4orf47A7E2U8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.66■□□□□ 0.74
C4orf47A7E2U8 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
C4orf47A7E2U8 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
C4orf47A7E2U8 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
C4orf47A7E2U8 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
C4orf47A7E2U8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
C4orf47A7E2U8 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
C4orf47A7E2U8 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
C4orf47A7E2U8 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
C4orf47A7E2U8 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
C4orf47A7E2U8 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.65■□□□□ 0.74
C4orf47A7E2U8 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
C4orf47A7E2U8 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
C4orf47A7E2U8 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
C4orf47A7E2U8 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.65■□□□□ 0.74
C4orf47A7E2U8 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
C4orf47A7E2U8 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
C4orf47A7E2U8 AC006011.2-201ENST00000621313 1158 ntBASIC19.65■□□□□ 0.74
C4orf47A7E2U8 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
C4orf47A7E2U8 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
C4orf47A7E2U8 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.65■□□□□ 0.74
C4orf47A7E2U8 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
C4orf47A7E2U8 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
C4orf47A7E2U8 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.64■□□□□ 0.74
C4orf47A7E2U8 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.64■□□□□ 0.73
C4orf47A7E2U8 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.64■□□□□ 0.73
C4orf47A7E2U8 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.64■□□□□ 0.73
C4orf47A7E2U8 KSR1P1-201ENST00000446298 240 ntBASIC19.64■□□□□ 0.73
C4orf47A7E2U8 AC023632.3-201ENST00000521633 145 ntBASIC19.64■□□□□ 0.73
C4orf47A7E2U8 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
C4orf47A7E2U8 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
C4orf47A7E2U8 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
C4orf47A7E2U8 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
C4orf47A7E2U8 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.64■□□□□ 0.73
C4orf47A7E2U8 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.64■□□□□ 0.73
C4orf47A7E2U8 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
C4orf47A7E2U8 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
C4orf47A7E2U8 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.63■□□□□ 0.73
C4orf47A7E2U8 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
C4orf47A7E2U8 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
C4orf47A7E2U8 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
C4orf47A7E2U8 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
C4orf47A7E2U8 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
C4orf47A7E2U8 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
C4orf47A7E2U8 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
C4orf47A7E2U8 AL121894.2-201ENST00000602977 491 ntBASIC19.63■□□□□ 0.73
C4orf47A7E2U8 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.63■□□□□ 0.73
C4orf47A7E2U8 AL358472.4-201ENST00000633140 710 ntBASIC19.63■□□□□ 0.73
C4orf47A7E2U8 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.63■□□□□ 0.73
C4orf47A7E2U8 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
C4orf47A7E2U8 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
C4orf47A7E2U8 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
C4orf47A7E2U8 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
C4orf47A7E2U8 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.62■□□□□ 0.73
C4orf47A7E2U8 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
C4orf47A7E2U8 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
C4orf47A7E2U8 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
C4orf47A7E2U8 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
C4orf47A7E2U8 KRT16P1-201ENST00000399124 1418 ntBASIC19.62■□□□□ 0.73
C4orf47A7E2U8 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
C4orf47A7E2U8 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.62■□□□□ 0.73
C4orf47A7E2U8 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.62■□□□□ 0.73
C4orf47A7E2U8 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.62■□□□□ 0.73
C4orf47A7E2U8 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.62■□□□□ 0.73
C4orf47A7E2U8 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.62■□□□□ 0.73
C4orf47A7E2U8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
C4orf47A7E2U8 TPM4P1-201ENST00000436100 807 ntBASIC19.62■□□□□ 0.73
C4orf47A7E2U8 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.62■□□□□ 0.73
C4orf47A7E2U8 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
C4orf47A7E2U8 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.62■□□□□ 0.73
C4orf47A7E2U8 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.62■□□□□ 0.73
C4orf47A7E2U8 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.62■□□□□ 0.73
C4orf47A7E2U8 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.62■□□□□ 0.73
C4orf47A7E2U8 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.62■□□□□ 0.73
C4orf47A7E2U8 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms