Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.76■□□□□ 0.59
TCRBV3S1A0A5B6 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV3S1A0A5B6 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TCRBV3S1A0A5B6 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TCRBV3S1A0A5B6 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.75■□□□□ 0.59
TCRBV3S1A0A5B6 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV3S1A0A5B6 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV3S1A0A5B6 CROCCP3-202ENST00000420820 1947 ntBASIC18.75■□□□□ 0.59
TCRBV3S1A0A5B6 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV3S1A0A5B6 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV3S1A0A5B6 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.75■□□□□ 0.59
TCRBV3S1A0A5B6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV3S1A0A5B6 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TCRBV3S1A0A5B6 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.75■□□□□ 0.59
TCRBV3S1A0A5B6 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.75■□□□□ 0.59
TCRBV3S1A0A5B6 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.75■□□□□ 0.59
TCRBV3S1A0A5B6 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.75■□□□□ 0.59
TCRBV3S1A0A5B6 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.75■□□□□ 0.59
TCRBV3S1A0A5B6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TCRBV3S1A0A5B6 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TCRBV3S1A0A5B6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV3S1A0A5B6 TSPY26P-201ENST00000476365 1326 ntBASIC18.74■□□□□ 0.59
TCRBV3S1A0A5B6 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TCRBV3S1A0A5B6 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TCRBV3S1A0A5B6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TCRBV3S1A0A5B6 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
TCRBV3S1A0A5B6 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.74■□□□□ 0.59
TCRBV3S1A0A5B6 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TCRBV3S1A0A5B6 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TCRBV3S1A0A5B6 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TCRBV3S1A0A5B6 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TCRBV3S1A0A5B6 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TCRBV3S1A0A5B6 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TCRBV3S1A0A5B6 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.74■□□□□ 0.59
TCRBV3S1A0A5B6 AC138907.5-202ENST00000569484 235 ntBASIC18.74■□□□□ 0.59
TCRBV3S1A0A5B6 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.74■□□□□ 0.59
TCRBV3S1A0A5B6 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TCRBV3S1A0A5B6 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TCRBV3S1A0A5B6 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TCRBV3S1A0A5B6 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.74■□□□□ 0.59
TCRBV3S1A0A5B6 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TCRBV3S1A0A5B6 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TCRBV3S1A0A5B6 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TCRBV3S1A0A5B6 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TCRBV3S1A0A5B6 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.73■□□□□ 0.59
TCRBV3S1A0A5B6 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.73■□□□□ 0.59
TCRBV3S1A0A5B6 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TCRBV3S1A0A5B6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TCRBV3S1A0A5B6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
TCRBV3S1A0A5B6 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TCRBV3S1A0A5B6 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.73■□□□□ 0.59
TCRBV3S1A0A5B6 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
TCRBV3S1A0A5B6 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TCRBV3S1A0A5B6 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TCRBV3S1A0A5B6 AL049812.1-201ENST00000432563 2267 ntBASIC18.73■□□□□ 0.59
TCRBV3S1A0A5B6 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TCRBV3S1A0A5B6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TCRBV3S1A0A5B6 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TCRBV3S1A0A5B6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TCRBV3S1A0A5B6 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TCRBV3S1A0A5B6 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
TCRBV3S1A0A5B6 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TCRBV3S1A0A5B6 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
TCRBV3S1A0A5B6 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TCRBV3S1A0A5B6 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TCRBV3S1A0A5B6 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TCRBV3S1A0A5B6 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TCRBV3S1A0A5B6 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TCRBV3S1A0A5B6 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TCRBV3S1A0A5B6 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.72■□□□□ 0.59
TCRBV3S1A0A5B6 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TCRBV3S1A0A5B6 AC007613.1-201ENST00000572811 2597 ntBASIC18.72■□□□□ 0.59
TCRBV3S1A0A5B6 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TCRBV3S1A0A5B6 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.72■□□□□ 0.59
TCRBV3S1A0A5B6 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TCRBV3S1A0A5B6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TCRBV3S1A0A5B6 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.72■□□□□ 0.59
TCRBV3S1A0A5B6 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
TCRBV3S1A0A5B6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.72■□□□□ 0.59
TCRBV3S1A0A5B6 AC131281.2-201ENST00000520478 145 ntBASIC18.72■□□□□ 0.59
TCRBV3S1A0A5B6 TPRG1LP1-201ENST00000598702 760 ntBASIC18.72■□□□□ 0.59
TCRBV3S1A0A5B6 AL035685.1-201ENST00000636663 812 ntBASIC18.72■□□□□ 0.59
TCRBV3S1A0A5B6 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
TCRBV3S1A0A5B6 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.72■□□□□ 0.59
TCRBV3S1A0A5B6 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TCRBV3S1A0A5B6 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TCRBV3S1A0A5B6 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.72■□□□□ 0.59
TCRBV3S1A0A5B6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TCRBV3S1A0A5B6 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TCRBV3S1A0A5B6 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TCRBV3S1A0A5B6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TCRBV3S1A0A5B6 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
TCRBV3S1A0A5B6 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TCRBV3S1A0A5B6 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TCRBV3S1A0A5B6 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.71■□□□□ 0.59
TCRBV3S1A0A5B6 MIR572-201ENST00000384983 95 ntBASIC18.71■□□□□ 0.59
TCRBV3S1A0A5B6 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TCRBV3S1A0A5B6 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TCRBV3S1A0A5B6 AC120498.10-201ENST00000621827 505 ntBASIC18.71■□□□□ 0.59
TCRBV3S1A0A5B6 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms