Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-1A0A0B4J241 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV13-1A0A0B4J241 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-1A0A0B4J241 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-1A0A0B4J241 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-1A0A0B4J241 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-1A0A0B4J241 EDA-201ENST00000338901 1233 ntBASIC13.94□□□□□ -0.18
TRAV13-1A0A0B4J241 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-1A0A0B4J241 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-1A0A0B4J241 EBPL-204ENST00000378272 766 ntTSL 3 BASIC13.94□□□□□ -0.18
TRAV13-1A0A0B4J241 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
TRAV13-1A0A0B4J241 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC13.94□□□□□ -0.18
TRAV13-1A0A0B4J241 AC079140.4-201ENST00000507448 529 ntBASIC13.94□□□□□ -0.18
TRAV13-1A0A0B4J241 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV13-1A0A0B4J241 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-1A0A0B4J241 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-1A0A0B4J241 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-1A0A0B4J241 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-1A0A0B4J241 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-1A0A0B4J241 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-1A0A0B4J241 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
TRAV13-1A0A0B4J241 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-1A0A0B4J241 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-1A0A0B4J241 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-1A0A0B4J241 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV13-1A0A0B4J241 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 AC116562.4-201ENST00000641316 2276 ntBASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 NT5C3AP1-201ENST00000394500 1012 ntBASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 AF213884.3-201ENST00000563833 479 ntBASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 AL355001.2-201ENST00000620617 1191 ntBASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 KRT87P-202ENST00000534226 1464 ntBASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-1A0A0B4J241 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV13-1A0A0B4J241 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV13-1A0A0B4J241 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV13-1A0A0B4J241 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC13.92□□□□□ -0.18
TRAV13-1A0A0B4J241 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAV13-1A0A0B4J241 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV13-1A0A0B4J241 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV13-1A0A0B4J241 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV13-1A0A0B4J241 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC13.92□□□□□ -0.18
TRAV13-1A0A0B4J241 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV13-1A0A0B4J241 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV13-1A0A0B4J241 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV13-1A0A0B4J241 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV13-1A0A0B4J241 AC091305.1-201ENST00000479476 895 ntBASIC13.92□□□□□ -0.18
TRAV13-1A0A0B4J241 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC13.92□□□□□ -0.18
TRAV13-1A0A0B4J241 AC012414.1-201ENST00000556676 535 ntBASIC13.92□□□□□ -0.18
TRAV13-1A0A0B4J241 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC13.92□□□□□ -0.18
TRAV13-1A0A0B4J241 AC106739.1-201ENST00000617035 715 ntBASIC13.92□□□□□ -0.18
TRAV13-1A0A0B4J241 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV13-1A0A0B4J241 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV13-1A0A0B4J241 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV13-1A0A0B4J241 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV13-1A0A0B4J241 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV13-1A0A0B4J241 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV13-1A0A0B4J241 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV13-1A0A0B4J241 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
TRAV13-1A0A0B4J241 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TRAV13-1A0A0B4J241 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV13-1A0A0B4J241 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV13-1A0A0B4J241 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV13-1A0A0B4J241 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms