Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IGKV1D-43A0A0B4J1Z2 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.71■□□□□ 0.43
IGKV1D-43A0A0B4J1Z2 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
IGKV1D-43A0A0B4J1Z2 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
IGKV1D-43A0A0B4J1Z2 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.71■□□□□ 0.43
IGKV1D-43A0A0B4J1Z2 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.71■□□□□ 0.43
IGKV1D-43A0A0B4J1Z2 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.71■□□□□ 0.43
IGKV1D-43A0A0B4J1Z2 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
IGKV1D-43A0A0B4J1Z2 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.71■□□□□ 0.43
IGKV1D-43A0A0B4J1Z2 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IGKV1D-43A0A0B4J1Z2 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
IGKV1D-43A0A0B4J1Z2 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.71■□□□□ 0.43
IGKV1D-43A0A0B4J1Z2 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IGKV1D-43A0A0B4J1Z2 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IGKV1D-43A0A0B4J1Z2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IGKV1D-43A0A0B4J1Z2 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
IGKV1D-43A0A0B4J1Z2 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IGKV1D-43A0A0B4J1Z2 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.71■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.7■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.7■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.7■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 AL031963.3-201ENST00000606441 850 ntBASIC17.7■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.69■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.69■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 MIPEPP3-201ENST00000412105 444 ntBASIC17.69■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.69■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.69■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.69■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.69■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.69■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.69■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.69■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 GPX1P1-201ENST00000388829 606 ntBASIC17.68■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 NCF1B-203ENST00000435988 1254 ntBASIC17.68■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.68■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.68■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 AL158211.5-201ENST00000623583 2518 ntBASIC17.67■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.67■□□□□ 0.42
IGKV1D-43A0A0B4J1Z2 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms