Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TRAV27A0A087WT01 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.15■□□□□ 0.5
TRAV27A0A087WT01 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV27A0A087WT01 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
TRAV27A0A087WT01 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
TRAV27A0A087WT01 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV27A0A087WT01 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV27A0A087WT01 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.15■□□□□ 0.5
TRAV27A0A087WT01 AL162412.1-201ENST00000567129 965 ntBASIC18.15■□□□□ 0.5
TRAV27A0A087WT01 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.15■□□□□ 0.5
TRAV27A0A087WT01 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV27A0A087WT01 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAV27A0A087WT01 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TRAV27A0A087WT01 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV27A0A087WT01 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAV27A0A087WT01 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV27A0A087WT01 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV27A0A087WT01 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV27A0A087WT01 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV27A0A087WT01 AC016769.1-201ENST00000409132 1010 ntBASIC18.14■□□□□ 0.49
TRAV27A0A087WT01 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TRAV27A0A087WT01 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV27A0A087WT01 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.14■□□□□ 0.49
TRAV27A0A087WT01 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV27A0A087WT01 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.14■□□□□ 0.49
TRAV27A0A087WT01 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
TRAV27A0A087WT01 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.14■□□□□ 0.49
TRAV27A0A087WT01 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV27A0A087WT01 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.14■□□□□ 0.49
TRAV27A0A087WT01 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV27A0A087WT01 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV27A0A087WT01 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TRAV27A0A087WT01 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAV27A0A087WT01 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV27A0A087WT01 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.13■□□□□ 0.49
TRAV27A0A087WT01 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.13■□□□□ 0.49
TRAV27A0A087WT01 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV27A0A087WT01 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV27A0A087WT01 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.13■□□□□ 0.49
TRAV27A0A087WT01 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV27A0A087WT01 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
TRAV27A0A087WT01 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TRAV27A0A087WT01 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV27A0A087WT01 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV27A0A087WT01 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV27A0A087WT01 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV27A0A087WT01 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.13■□□□□ 0.49
TRAV27A0A087WT01 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV27A0A087WT01 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV27A0A087WT01 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV27A0A087WT01 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV27A0A087WT01 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.12■□□□□ 0.49
TRAV27A0A087WT01 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV27A0A087WT01 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV27A0A087WT01 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.12■□□□□ 0.49
TRAV27A0A087WT01 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.12■□□□□ 0.49
TRAV27A0A087WT01 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.12■□□□□ 0.49
TRAV27A0A087WT01 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV27A0A087WT01 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.12■□□□□ 0.49
TRAV27A0A087WT01 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.12■□□□□ 0.49
TRAV27A0A087WT01 AC011767.1-201ENST00000617410 1153 ntBASIC18.12■□□□□ 0.49
TRAV27A0A087WT01 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.12■□□□□ 0.49
TRAV27A0A087WT01 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.12■□□□□ 0.49
TRAV27A0A087WT01 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
TRAV27A0A087WT01 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV27A0A087WT01 AC116562.4-201ENST00000641316 2276 ntBASIC18.12■□□□□ 0.49
TRAV27A0A087WT01 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV27A0A087WT01 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV27A0A087WT01 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV27A0A087WT01 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAV27A0A087WT01 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TRAV27A0A087WT01 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAV27A0A087WT01 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV27A0A087WT01 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV27A0A087WT01 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.11■□□□□ 0.49
TRAV27A0A087WT01 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
TRAV27A0A087WT01 CNN2P6-201ENST00000439038 900 ntBASIC18.11■□□□□ 0.49
TRAV27A0A087WT01 RARRES2P4-201ENST00000514074 484 ntBASIC18.11■□□□□ 0.49
TRAV27A0A087WT01 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.11■□□□□ 0.49
TRAV27A0A087WT01 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAV27A0A087WT01 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAV27A0A087WT01 DUX4L16-201ENST00000555130 1264 ntBASIC18.11■□□□□ 0.49
TRAV27A0A087WT01 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV27A0A087WT01 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV27A0A087WT01 TMEM179-206ENST00000616017 1645 ntBASIC18.11■□□□□ 0.49
TRAV27A0A087WT01 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAV27A0A087WT01 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TRAV27A0A087WT01 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV27A0A087WT01 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.11■□□□□ 0.49
TRAV27A0A087WT01 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.11■□□□□ 0.49
TRAV27A0A087WT01 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV27A0A087WT01 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAV27A0A087WT01 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TRAV27A0A087WT01 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV27A0A087WT01 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV27A0A087WT01 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV27A0A087WT01 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV27A0A087WT01 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV27A0A087WT01 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TRAV27A0A087WT01 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms