Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC8.39□□□□□ -1.07
CDK5RAP2Q96SN8 SUPT16H-201ENST00000216297 4684 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDK5RAP2Q96SN8 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC8.39□□□□□ -1.07
CDK5RAP2Q96SN8 ATG13-203ENST00000524625 4014 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDK5RAP2Q96SN8 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CDK5RAP2Q96SN8 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDK5RAP2Q96SN8 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 RN7SKP205-201ENST00000410999 307 ntBASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 TFP1-201ENST00000460564 572 ntTSL 4 BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 AP000805.1-201ENST00000471604 784 ntBASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 TFP1-203ENST00000490470 561 ntTSL 4 BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 MRPS5P3-201ENST00000515577 166 ntBASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 SCARNA6-201ENST00000515982 265 ntBASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 AC005479.3-201ENST00000602790 431 ntBASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 PCAT18-201ENST00000579458 2598 ntTSL 2 BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 DROSHA-201ENST00000344624 5102 ntAPPRIS P4 TSL 5 BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 ABLIM1-206ENST00000392952 6841 ntTSL 5 BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 AL121949.2-201ENST00000403446 1548 ntBASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 NEK1-207ENST00000511633 5536 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 PTAFR-202ENST00000373857 4491 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 AL353133.1-201ENST00000407695 401 ntBASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 AL589794.1-201ENST00000424971 390 ntBASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 SNRPEP5-201ENST00000425442 278 ntBASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 MYL6P3-201ENST00000436904 432 ntBASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 NMNAT1P3-201ENST00000457517 888 ntBASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 NACAP5-201ENST00000509863 636 ntBASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 IGHVII-51-2-201ENST00000519778 259 ntBASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 AL137000.1-201ENST00000610528 1244 ntBASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 CBFA2T2-203ENST00000346541 7737 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC8.38□□□□□ -1.07
CDK5RAP2Q96SN8 SHTN1-207ENST00000615301 6730 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDK5RAP2Q96SN8 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC8.37□□□□□ -1.07
CDK5RAP2Q96SN8 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC8.37□□□□□ -1.07
CDK5RAP2Q96SN8 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC8.37□□□□□ -1.07
CDK5RAP2Q96SN8 GOLGA8B-202ENST00000438958 4252 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
CDK5RAP2Q96SN8 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDK5RAP2Q96SN8 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC8.37□□□□□ -1.07
CDK5RAP2Q96SN8 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC8.37□□□□□ -1.07
CDK5RAP2Q96SN8 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDK5RAP2Q96SN8 OR10D1P-201ENST00000355343 936 ntBASIC8.37□□□□□ -1.07
CDK5RAP2Q96SN8 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
CDK5RAP2Q96SN8 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC8.37□□□□□ -1.07
CDK5RAP2Q96SN8 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC8.37□□□□□ -1.07
CDK5RAP2Q96SN8 PTPN2P1-201ENST00000423212 1072 ntBASIC8.37□□□□□ -1.07
CDK5RAP2Q96SN8 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC8.37□□□□□ -1.07
CDK5RAP2Q96SN8 AL049651.1-201ENST00000440798 719 ntTSL 5 BASIC8.37□□□□□ -1.07
CDK5RAP2Q96SN8 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC8.37□□□□□ -1.07
CDK5RAP2Q96SN8 RN7SL325P-201ENST00000460434 283 ntBASIC8.37□□□□□ -1.07
CDK5RAP2Q96SN8 RN7SL372P-201ENST00000461982 298 ntBASIC8.37□□□□□ -1.07
CDK5RAP2Q96SN8 AK6-203ENST00000502819 743 ntTSL 5 BASIC8.37□□□□□ -1.07
CDK5RAP2Q96SN8 RN7SKP11-201ENST00000517018 287 ntBASIC8.37□□□□□ -1.07
CDK5RAP2Q96SN8 AC100854.1-201ENST00000520351 341 ntBASIC8.37□□□□□ -1.07
CDK5RAP2Q96SN8 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC8.37□□□□□ -1.07
CDK5RAP2Q96SN8 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC8.37□□□□□ -1.07
CDK5RAP2Q96SN8 PPIAP6-201ENST00000557078 499 ntBASIC8.37□□□□□ -1.07
CDK5RAP2Q96SN8 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC8.37□□□□□ -1.07
CDK5RAP2Q96SN8 AC138207.8-204ENST00000579588 527 ntBASIC8.37□□□□□ -1.07
CDK5RAP2Q96SN8 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC8.37□□□□□ -1.07
CDK5RAP2Q96SN8 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC8.37□□□□□ -1.07
CDK5RAP2Q96SN8 IGKV2OR2-7-201ENST00000604652 304 ntBASIC8.37□□□□□ -1.07
CDK5RAP2Q96SN8 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CDK5RAP2Q96SN8 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC8.37□□□□□ -1.07
CDK5RAP2Q96SN8 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC8.37□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms