Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 TAAR3P-202ENST00000481759 1025 ntBASIC7.74□□□□□ -1.17
APOEP02649 AC108120.1-201ENST00000506543 991 ntBASIC7.74□□□□□ -1.17
APOEP02649 LINC01288-201ENST00000519189 529 ntTSL 4 BASIC7.74□□□□□ -1.17
APOEP02649 IGKV2-29-201ENST00000521304 372 ntBASIC7.74□□□□□ -1.17
APOEP02649 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC7.74□□□□□ -1.17
APOEP02649 AC138749.2-201ENST00000566048 167 ntBASIC7.74□□□□□ -1.17
APOEP02649 AC105275.2-201ENST00000567907 711 ntBASIC7.74□□□□□ -1.17
APOEP02649 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC7.74□□□□□ -1.17
APOEP02649 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC7.74□□□□□ -1.17
APOEP02649 AC108451.2-201ENST00000603875 538 ntBASIC7.74□□□□□ -1.17
APOEP02649 AC027348.2-201ENST00000624375 642 ntBASIC7.74□□□□□ -1.17
APOEP02649 FGL2-202ENST00000637771 989 ntBASIC7.74□□□□□ -1.17
APOEP02649 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC7.74□□□□□ -1.17
APOEP02649 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
APOEP02649 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
APOEP02649 NUMB-211ENST00000554521 1406 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
APOEP02649 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
APOEP02649 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC7.74□□□□□ -1.17
APOEP02649 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC7.74□□□□□ -1.17
APOEP02649 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
APOEP02649 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
APOEP02649 AL353622.1-201ENST00000604716 1945 ntBASIC7.74□□□□□ -1.17
APOEP02649 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC7.73□□□□□ -1.17
APOEP02649 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
APOEP02649 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
APOEP02649 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
APOEP02649 AKT3-202ENST00000336199 1688 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
APOEP02649 EEF1A1P22-201ENST00000559385 1380 ntBASIC7.73□□□□□ -1.17
APOEP02649 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
APOEP02649 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
APOEP02649 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
APOEP02649 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
APOEP02649 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC7.73□□□□□ -1.17
APOEP02649 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC7.73□□□□□ -1.17
APOEP02649 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
APOEP02649 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
APOEP02649 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
APOEP02649 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
APOEP02649 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC7.73□□□□□ -1.17
APOEP02649 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC7.73□□□□□ -1.17
APOEP02649 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
APOEP02649 RPSAP44-201ENST00000406712 884 ntBASIC7.73□□□□□ -1.17
APOEP02649 FTOP1-201ENST00000419363 861 ntBASIC7.73□□□□□ -1.17
APOEP02649 MIR4435-2HG-205ENST00000431385 843 ntTSL 3 BASIC7.73□□□□□ -1.17
APOEP02649 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
APOEP02649 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC7.73□□□□□ -1.17
APOEP02649 AC018475.1-201ENST00000478358 465 ntBASIC7.73□□□□□ -1.17
APOEP02649 AC103409.1-201ENST00000521199 564 ntTSL 5 BASIC7.73□□□□□ -1.17
APOEP02649 PTTG3P-201ENST00000521862 606 ntBASIC7.73□□□□□ -1.17
APOEP02649 RN7SL835P-201ENST00000579920 262 ntBASIC7.73□□□□□ -1.17
APOEP02649 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
APOEP02649 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC7.73□□□□□ -1.17
APOEP02649 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC7.73□□□□□ -1.17
APOEP02649 AC012511.1-201ENST00000608140 449 ntBASIC7.73□□□□□ -1.17
APOEP02649 AC143336.1-201ENST00000614164 836 ntBASIC7.73□□□□□ -1.17
APOEP02649 HBG1-202ENST00000632727 369 ntTSL 3 BASIC7.73□□□□□ -1.17
APOEP02649 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC7.73□□□□□ -1.17
APOEP02649 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
APOEP02649 SAMMSON-222ENST00000641901 2727 ntBASIC7.73□□□□□ -1.17
APOEP02649 AC069222.1-201ENST00000608028 3360 ntBASIC7.73□□□□□ -1.17
APOEP02649 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
APOEP02649 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
APOEP02649 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
APOEP02649 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
APOEP02649 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
APOEP02649 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
APOEP02649 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
APOEP02649 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
APOEP02649 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
APOEP02649 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
APOEP02649 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
APOEP02649 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC7.72□□□□□ -1.17
APOEP02649 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
APOEP02649 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC7.72□□□□□ -1.17
APOEP02649 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
APOEP02649 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
APOEP02649 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
APOEP02649 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
APOEP02649 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
APOEP02649 DMD-211ENST00000378707 7410 ntTSL 5 BASIC7.72□□□□□ -1.17
APOEP02649 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC7.72□□□□□ -1.17
APOEP02649 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC7.72□□□□□ -1.17
APOEP02649 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
APOEP02649 TFDP2-222ENST00000495310 1442 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
APOEP02649 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
APOEP02649 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
APOEP02649 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC7.72□□□□□ -1.17
APOEP02649 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
APOEP02649 RN7SKP36-201ENST00000363997 312 ntBASIC7.72□□□□□ -1.17
APOEP02649 MORN2-202ENST00000409077 465 ntTSL 5 BASIC7.72□□□□□ -1.17
APOEP02649 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC7.72□□□□□ -1.17
APOEP02649 AC073987.1-201ENST00000422683 638 ntTSL 3 BASIC7.72□□□□□ -1.17
APOEP02649 FTH1P10-202ENST00000430907 550 ntBASIC7.72□□□□□ -1.17
APOEP02649 PIP5K1P2-201ENST00000437005 1120 ntBASIC7.72□□□□□ -1.17
APOEP02649 TULP3P1-201ENST00000442322 816 ntTSL 3 BASIC7.72□□□□□ -1.17
APOEP02649 RHEBP1-201ENST00000448647 556 ntBASIC7.72□□□□□ -1.17
APOEP02649 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC7.72□□□□□ -1.17
APOEP02649 RN7SL145P-201ENST00000469955 296 ntBASIC7.72□□□□□ -1.17
APOEP02649 RN7SL751P-201ENST00000473281 284 ntBASIC7.72□□□□□ -1.17
APOEP02649 RASGRF2-AS1-201ENST00000505107 665 ntTSL 3 BASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms