Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LCA10Q71F78 MRRFP1-201ENST00000435941 1675 ntBASIC4.03□□□□□ -1.76
LCA10Q71F78 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LCA10Q71F78 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC4.03□□□□□ -1.76
LCA10Q71F78 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LCA10Q71F78 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC4.03□□□□□ -1.77
LCA10Q71F78 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.77
LCA10Q71F78 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.77
LCA10Q71F78 UGT2B27P-201ENST00000505092 1620 ntBASIC4.03□□□□□ -1.77
LCA10Q71F78 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC4.02□□□□□ -1.77
LCA10Q71F78 AL353796.1-201ENST00000561542 3241 ntBASIC4.02□□□□□ -1.77
LCA10Q71F78 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LCA10Q71F78 LRRC37A12P-201ENST00000454917 1801 ntBASIC4.02□□□□□ -1.77
LCA10Q71F78 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LCA10Q71F78 LDAH-201ENST00000237822 2907 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LCA10Q71F78 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LCA10Q71F78 OGFOD1P1-201ENST00000447552 1592 ntBASIC4.02□□□□□ -1.77
LCA10Q71F78 TNMD-201ENST00000373031 1339 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LCA10Q71F78 AC090984.1-201ENST00000623172 1332 ntBASIC4.02□□□□□ -1.77
LCA10Q71F78 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LCA10Q71F78 MTCO1P15-201ENST00000529569 1526 ntBASIC4.02□□□□□ -1.77
LCA10Q71F78 SAMMSON-213ENST00000641336 1521 ntBASIC4.02□□□□□ -1.77
LCA10Q71F78 GLYAT-202ENST00000344743 1735 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LCA10Q71F78 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
LCA10Q71F78 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LCA10Q71F78 GNPDA2-201ENST00000295448 1930 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
LCA10Q71F78 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LCA10Q71F78 RNASE3-201ENST00000304639 720 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LCA10Q71F78 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
LCA10Q71F78 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
LCA10Q71F78 ZNF254-201ENST00000339642 511 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LCA10Q71F78 POLR2K-201ENST00000353107 998 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LCA10Q71F78 NEK10-203ENST00000383770 1257 ntTSL 5 BASIC4.02□□□□□ -1.77
LCA10Q71F78 TIMD4-202ENST00000406964 581 ntTSL 2 BASIC4.02□□□□□ -1.77
LCA10Q71F78 RN7SKP136-201ENST00000410927 300 ntBASIC4.02□□□□□ -1.77
LCA10Q71F78 LINC01799-201ENST00000411701 386 ntTSL 3 BASIC4.02□□□□□ -1.77
LCA10Q71F78 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC4.02□□□□□ -1.77
LCA10Q71F78 AL645937.5-202ENST00000415595 944 ntBASIC4.02□□□□□ -1.77
LCA10Q71F78 LINC01238-201ENST00000416204 590 ntTSL 2 BASIC4.02□□□□□ -1.77
LCA10Q71F78 AC008496.2-201ENST00000421252 460 ntTSL 3 BASIC4.02□□□□□ -1.77
LCA10Q71F78 LINC02093-201ENST00000440522 485 ntTSL 5 BASIC4.02□□□□□ -1.77
LCA10Q71F78 PMS2P9-201ENST00000441237 515 ntBASIC4.02□□□□□ -1.77
LCA10Q71F78 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.02□□□□□ -1.77
LCA10Q71F78 LINC00265-202ENST00000448955 468 ntTSL 2 BASIC4.02□□□□□ -1.77
LCA10Q71F78 AL513542.1-201ENST00000452494 731 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LCA10Q71F78 AL360181.1-201ENST00000452591 184 ntTSL 5 BASIC4.02□□□□□ -1.77
LCA10Q71F78 SCDP1-201ENST00000455244 1081 ntBASIC4.02□□□□□ -1.77
LCA10Q71F78 NPAP1P2-201ENST00000456716 1234 ntBASIC4.02□□□□□ -1.77
LCA10Q71F78 RN7SL554P-201ENST00000468197 292 ntBASIC4.02□□□□□ -1.77
LCA10Q71F78 TRIM2-207ENST00000482578 773 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LCA10Q71F78 RN7SL745P-201ENST00000484900 299 ntBASIC4.02□□□□□ -1.77
LCA10Q71F78 RPSAP52-201ENST00000489520 1144 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LCA10Q71F78 RN7SL598P-201ENST00000494391 294 ntBASIC4.02□□□□□ -1.77
LCA10Q71F78 RPL5P11-201ENST00000498068 893 ntBASIC4.02□□□□□ -1.77
LCA10Q71F78 AL390726.2-201ENST00000504791 343 ntBASIC4.02□□□□□ -1.77
LCA10Q71F78 AMD1P3-201ENST00000508874 994 ntBASIC4.02□□□□□ -1.77
LCA10Q71F78 EGFLAM-AS1-201ENST00000508986 331 ntTSL 3 BASIC4.02□□□□□ -1.77
LCA10Q71F78 RNA5SP278-201ENST00000517055 102 ntBASIC4.02□□□□□ -1.77
LCA10Q71F78 IGHV3-36-201ENST00000520848 401 ntBASIC4.02□□□□□ -1.77
LCA10Q71F78 AC144568.2-201ENST00000522481 944 ntTSL 5 BASIC4.02□□□□□ -1.77
LCA10Q71F78 AF279873.3-201ENST00000523063 766 ntTSL 3 BASIC4.02□□□□□ -1.77
LCA10Q71F78 AC023644.1-201ENST00000523380 859 ntTSL 5 BASIC4.02□□□□□ -1.77
LCA10Q71F78 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.02□□□□□ -1.77
LCA10Q71F78 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC4.02□□□□□ -1.77
LCA10Q71F78 AC006065.2-201ENST00000536978 211 ntBASIC4.02□□□□□ -1.77
LCA10Q71F78 TMEM106C-212ENST00000549288 321 ntTSL 3 BASIC4.02□□□□□ -1.77
LCA10Q71F78 OTX2-204ENST00000554788 835 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LCA10Q71F78 HNRNPCP1-201ENST00000556181 766 ntBASIC4.02□□□□□ -1.77
LCA10Q71F78 AC013457.1-201ENST00000556770 1011 ntTSL 3 BASIC4.02□□□□□ -1.77
LCA10Q71F78 AC116348.2-201ENST00000563751 577 ntTSL 4 BASIC4.02□□□□□ -1.77
LCA10Q71F78 AC092287.1-201ENST00000565782 463 ntTSL 3 BASIC4.02□□□□□ -1.77
LCA10Q71F78 AL157931.1-201ENST00000575845 585 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LCA10Q71F78 AC025198.1-201ENST00000578331 419 ntBASIC4.02□□□□□ -1.77
LCA10Q71F78 AP000915.1-201ENST00000580756 548 ntTSL 3 BASIC4.02□□□□□ -1.77
LCA10Q71F78 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC4.02□□□□□ -1.77
LCA10Q71F78 KCTD2-206ENST00000581589 993 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LCA10Q71F78 RN7SL220P-201ENST00000581978 300 ntBASIC4.02□□□□□ -1.77
LCA10Q71F78 AC100843.2-201ENST00000589084 324 ntTSL 5 BASIC4.02□□□□□ -1.77
LCA10Q71F78 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC4.02□□□□□ -1.77
LCA10Q71F78 AP001198.2-201ENST00000593121 466 ntTSL 2 BASIC4.02□□□□□ -1.77
LCA10Q71F78 ZSCAN30-210ENST00000601405 510 ntTSL 5 BASIC4.02□□□□□ -1.77
LCA10Q71F78 AC026150.3-201ENST00000602595 499 ntBASIC4.02□□□□□ -1.77
LCA10Q71F78 AC006363.1-201ENST00000603806 463 ntBASIC4.02□□□□□ -1.77
LCA10Q71F78 AC002059.1-201ENST00000608014 477 ntBASIC4.02□□□□□ -1.77
LCA10Q71F78 AL121928.1-201ENST00000608017 521 ntBASIC4.02□□□□□ -1.77
LCA10Q71F78 AC018926.2-201ENST00000611214 498 ntBASIC4.02□□□□□ -1.77
LCA10Q71F78 RN7SL82P-201ENST00000611435 237 ntBASIC4.02□□□□□ -1.77
LCA10Q71F78 FAM30B-201ENST00000611556 397 ntBASIC4.02□□□□□ -1.77
LCA10Q71F78 LINC02391-201ENST00000615716 800 ntTSL 5 BASIC4.02□□□□□ -1.77
LCA10Q71F78 MIR6776-201ENST00000616678 59 ntBASIC4.02□□□□□ -1.77
LCA10Q71F78 RN7SL628P-201ENST00000619139 237 ntBASIC4.02□□□□□ -1.77
LCA10Q71F78 MIR6880-201ENST00000622851 62 ntBASIC4.02□□□□□ -1.77
LCA10Q71F78 AC090373.1-201ENST00000623955 603 ntBASIC4.02□□□□□ -1.77
LCA10Q71F78 AL356095.2-201ENST00000624025 457 ntBASIC4.02□□□□□ -1.77
LCA10Q71F78 AL589666.2-201ENST00000624603 618 ntBASIC4.02□□□□□ -1.77
LCA10Q71F78 ANKMY2-205ENST00000627859 210 ntTSL 5 BASIC4.02□□□□□ -1.77
LCA10Q71F78 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC4.02□□□□□ -1.77
LCA10Q71F78 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC4.02□□□□□ -1.77
LCA10Q71F78 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LCA10Q71F78 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms