Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LMO3Q8TAP4 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
LMO3Q8TAP4 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC7.78□□□□□ -1.16
LMO3Q8TAP4 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LMO3Q8TAP4 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LMO3Q8TAP4 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
LMO3Q8TAP4 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LMO3Q8TAP4 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC7.78□□□□□ -1.16
LMO3Q8TAP4 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.16
LMO3Q8TAP4 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC7.77□□□□□ -1.16
LMO3Q8TAP4 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
LMO3Q8TAP4 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
LMO3Q8TAP4 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.77□□□□□ -1.17
LMO3Q8TAP4 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
LMO3Q8TAP4 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
LMO3Q8TAP4 SNORA30B-201ENST00000365319 129 ntBASIC7.77□□□□□ -1.17
LMO3Q8TAP4 RBBP4P4-201ENST00000398588 1289 ntBASIC7.77□□□□□ -1.17
LMO3Q8TAP4 SUMO2P13-201ENST00000403109 272 ntBASIC7.77□□□□□ -1.17
LMO3Q8TAP4 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC7.77□□□□□ -1.17
LMO3Q8TAP4 NPM1P30-201ENST00000425092 828 ntBASIC7.77□□□□□ -1.17
LMO3Q8TAP4 PSPC1P2-201ENST00000455130 225 ntBASIC7.77□□□□□ -1.17
LMO3Q8TAP4 RN7SL647P-201ENST00000485429 300 ntBASIC7.77□□□□□ -1.17
LMO3Q8TAP4 RN7SL182P-201ENST00000496499 300 ntBASIC7.77□□□□□ -1.17
LMO3Q8TAP4 AC112225.1-201ENST00000508230 297 ntBASIC7.77□□□□□ -1.17
LMO3Q8TAP4 AC018523.1-201ENST00000534211 512 ntBASIC7.77□□□□□ -1.17
LMO3Q8TAP4 DCTN5-204ENST00000563998 878 ntTSL 3 BASIC7.77□□□□□ -1.17
LMO3Q8TAP4 EEF1B2P1-201ENST00000567221 672 ntBASIC7.77□□□□□ -1.17
LMO3Q8TAP4 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC7.77□□□□□ -1.17
LMO3Q8TAP4 RN7SL667P-201ENST00000582817 298 ntBASIC7.77□□□□□ -1.17
LMO3Q8TAP4 AP005329.3-201ENST00000609924 686 ntBASIC7.77□□□□□ -1.17
LMO3Q8TAP4 AL121809.2-201ENST00000613169 341 ntBASIC7.77□□□□□ -1.17
LMO3Q8TAP4 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC7.77□□□□□ -1.17
LMO3Q8TAP4 FGL2-202ENST00000637771 989 ntBASIC7.77□□□□□ -1.17
LMO3Q8TAP4 CASC19-232ENST00000641480 1244 ntBASIC7.77□□□□□ -1.17
LMO3Q8TAP4 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
LMO3Q8TAP4 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
LMO3Q8TAP4 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC7.77□□□□□ -1.17
LMO3Q8TAP4 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
LMO3Q8TAP4 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC7.77□□□□□ -1.17
LMO3Q8TAP4 THAP12P3-201ENST00000456373 2266 ntBASIC7.77□□□□□ -1.17
LMO3Q8TAP4 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
LMO3Q8TAP4 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC7.77□□□□□ -1.17
LMO3Q8TAP4 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
LMO3Q8TAP4 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
LMO3Q8TAP4 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
LMO3Q8TAP4 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
LMO3Q8TAP4 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC7.76□□□□□ -1.17
LMO3Q8TAP4 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
LMO3Q8TAP4 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
LMO3Q8TAP4 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
LMO3Q8TAP4 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
LMO3Q8TAP4 CYP39A1-201ENST00000275016 2176 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
LMO3Q8TAP4 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
LMO3Q8TAP4 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
LMO3Q8TAP4 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
LMO3Q8TAP4 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC7.76□□□□□ -1.17
LMO3Q8TAP4 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
LMO3Q8TAP4 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
LMO3Q8TAP4 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
LMO3Q8TAP4 RNU6-1055P-201ENST00000391085 107 ntBASIC7.76□□□□□ -1.17
LMO3Q8TAP4 NHP2P2-201ENST00000396362 460 ntBASIC7.76□□□□□ -1.17
LMO3Q8TAP4 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC7.76□□□□□ -1.17
LMO3Q8TAP4 RN7SKP232-201ENST00000410170 290 ntBASIC7.76□□□□□ -1.17
LMO3Q8TAP4 RN7SKP236-201ENST00000410635 284 ntBASIC7.76□□□□□ -1.17
LMO3Q8TAP4 SNX18P13-201ENST00000412442 529 ntBASIC7.76□□□□□ -1.17
LMO3Q8TAP4 AC017104.2-201ENST00000417000 321 ntBASIC7.76□□□□□ -1.17
LMO3Q8TAP4 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC7.76□□□□□ -1.17
LMO3Q8TAP4 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC7.76□□□□□ -1.17
LMO3Q8TAP4 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC7.76□□□□□ -1.17
LMO3Q8TAP4 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC7.76□□□□□ -1.17
LMO3Q8TAP4 AC105052.2-201ENST00000434317 794 ntBASIC7.76□□□□□ -1.17
LMO3Q8TAP4 FDPSP8-201ENST00000438304 1089 ntBASIC7.76□□□□□ -1.17
LMO3Q8TAP4 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC7.76□□□□□ -1.17
LMO3Q8TAP4 RPL21P33-201ENST00000444831 484 ntBASIC7.76□□□□□ -1.17
LMO3Q8TAP4 GTF2F2P2-201ENST00000445825 721 ntBASIC7.76□□□□□ -1.17
LMO3Q8TAP4 AGKP1-201ENST00000455254 1263 ntBASIC7.76□□□□□ -1.17
LMO3Q8TAP4 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC7.76□□□□□ -1.17
LMO3Q8TAP4 GAPDHP38-201ENST00000503632 1002 ntBASIC7.76□□□□□ -1.17
LMO3Q8TAP4 TPT1-AS1-214ENST00000521507 665 ntTSL 5 BASIC7.76□□□□□ -1.17
LMO3Q8TAP4 NDUFA3P4-201ENST00000560814 250 ntBASIC7.76□□□□□ -1.17
LMO3Q8TAP4 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC7.76□□□□□ -1.17
LMO3Q8TAP4 AC006116.6-201ENST00000593258 1103 ntBASIC7.76□□□□□ -1.17
LMO3Q8TAP4 AC004839.1-201ENST00000610269 501 ntBASIC7.76□□□□□ -1.17
LMO3Q8TAP4 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC7.76□□□□□ -1.17
LMO3Q8TAP4 uc_338.37-201ENST00000620113 186 ntBASIC7.76□□□□□ -1.17
LMO3Q8TAP4 BX005040.2-201ENST00000620504 370 ntBASIC7.76□□□□□ -1.17
LMO3Q8TAP4 HBG1-202ENST00000632727 369 ntTSL 3 BASIC7.76□□□□□ -1.17
LMO3Q8TAP4 AC073488.7-201ENST00000633785 778 ntBASIC7.76□□□□□ -1.17
LMO3Q8TAP4 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC7.76□□□□□ -1.17
LMO3Q8TAP4 AL139254.2-202ENST00000641937 1156 ntBASIC7.76□□□□□ -1.17
LMO3Q8TAP4 AL596275.2-203ENST00000641951 371 ntBASIC7.76□□□□□ -1.17
LMO3Q8TAP4 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
LMO3Q8TAP4 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC7.76□□□□□ -1.17
LMO3Q8TAP4 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
LMO3Q8TAP4 AL121949.2-201ENST00000403446 1548 ntBASIC7.76□□□□□ -1.17
LMO3Q8TAP4 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
LMO3Q8TAP4 AC034111.1-201ENST00000562143 3770 ntBASIC7.76□□□□□ -1.17
LMO3Q8TAP4 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
LMO3Q8TAP4 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC7.76□□□□□ -1.17
LMO3Q8TAP4 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms