Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC6.51□□□□□ -1.37
FOXG1P55316 AC099667.1-201ENST00000624222 469 ntBASIC6.51□□□□□ -1.37
FOXG1P55316 AC022743.1-201ENST00000624990 664 ntBASIC6.51□□□□□ -1.37
FOXG1P55316 SATB1-AS1-242ENST00000627496 807 ntTSL 5 BASIC6.51□□□□□ -1.37
FOXG1P55316 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC6.51□□□□□ -1.37
FOXG1P55316 CASC19-208ENST00000641056 1292 ntBASIC6.51□□□□□ -1.37
FOXG1P55316 CASC19-227ENST00000641411 1285 ntBASIC6.51□□□□□ -1.37
FOXG1P55316 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
FOXG1P55316 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
FOXG1P55316 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
FOXG1P55316 EEF1A1P26-201ENST00000458319 1363 ntBASIC6.51□□□□□ -1.37
FOXG1P55316 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
FOXG1P55316 ELF5-201ENST00000257832 2321 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
FOXG1P55316 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC6.51□□□□□ -1.37
FOXG1P55316 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
FOXG1P55316 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
FOXG1P55316 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
FOXG1P55316 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
FOXG1P55316 AL136298.2-201ENST00000556497 1570 ntBASIC6.51□□□□□ -1.37
FOXG1P55316 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
FOXG1P55316 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
FOXG1P55316 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
FOXG1P55316 HSPA8P11-201ENST00000508840 1898 ntBASIC6.51□□□□□ -1.37
FOXG1P55316 ATM-215ENST00000530958 5718 ntTSL 2 BASIC6.51□□□□□ -1.37
FOXG1P55316 ZNF840P-201ENST00000504759 1996 ntBASIC6.51□□□□□ -1.37
FOXG1P55316 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
FOXG1P55316 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
FOXG1P55316 BMX-203ENST00000357607 2598 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
FOXG1P55316 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
FOXG1P55316 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
FOXG1P55316 CD40LG-201ENST00000370628 1720 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
FOXG1P55316 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC6.5□□□□□ -1.37
FOXG1P55316 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
FOXG1P55316 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
FOXG1P55316 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
FOXG1P55316 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
FOXG1P55316 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC6.5□□□□□ -1.37
FOXG1P55316 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
FOXG1P55316 AC133552.3-201ENST00000572236 1869 ntBASIC6.5□□□□□ -1.37
FOXG1P55316 AL353898.3-201ENST00000624679 1755 ntBASIC6.5□□□□□ -1.37
FOXG1P55316 HSPD1P10-201ENST00000404829 1676 ntBASIC6.5□□□□□ -1.37
FOXG1P55316 ASIC5-201ENST00000537611 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
FOXG1P55316 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
FOXG1P55316 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
FOXG1P55316 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
FOXG1P55316 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
FOXG1P55316 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
FOXG1P55316 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
FOXG1P55316 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
FOXG1P55316 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
FOXG1P55316 AC073310.1-201ENST00000423226 1033 ntBASIC6.5□□□□□ -1.37
FOXG1P55316 CENPN-204ENST00000428963 971 ntTSL 2 BASIC6.5□□□□□ -1.37
FOXG1P55316 CR391992.1-201ENST00000438601 394 ntBASIC6.5□□□□□ -1.37
FOXG1P55316 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC6.5□□□□□ -1.37
FOXG1P55316 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC6.5□□□□□ -1.37
FOXG1P55316 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC6.5□□□□□ -1.37
FOXG1P55316 AL929410.2-201ENST00000451170 189 ntBASIC6.5□□□□□ -1.37
FOXG1P55316 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
FOXG1P55316 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC6.5□□□□□ -1.37
FOXG1P55316 MRPL49P1-201ENST00000505951 535 ntBASIC6.5□□□□□ -1.37
FOXG1P55316 TRAV11-201ENST00000539512 339 ntBASIC6.5□□□□□ -1.37
FOXG1P55316 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC6.5□□□□□ -1.37
FOXG1P55316 RAP1B-230ENST00000543697 734 ntTSL 3 BASIC6.5□□□□□ -1.37
FOXG1P55316 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC6.5□□□□□ -1.37
FOXG1P55316 FOXG1-AS1-203ENST00000551395 602 ntTSL 4 BASIC6.5□□□□□ -1.37
FOXG1P55316 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC6.5□□□□□ -1.37
FOXG1P55316 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
FOXG1P55316 AL035417.2-201ENST00000603887 796 ntBASIC6.5□□□□□ -1.37
FOXG1P55316 uc_338.21-201ENST00000622458 147 ntBASIC6.5□□□□□ -1.37
FOXG1P55316 DLST-216ENST00000626051 252 ntTSL 5 BASIC6.5□□□□□ -1.37
FOXG1P55316 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC6.5□□□□□ -1.37
FOXG1P55316 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
FOXG1P55316 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC6.5□□□□□ -1.37
FOXG1P55316 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
FOXG1P55316 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
FOXG1P55316 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
FOXG1P55316 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
FOXG1P55316 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
FOXG1P55316 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
FOXG1P55316 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC6.5□□□□□ -1.37
FOXG1P55316 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
FOXG1P55316 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
FOXG1P55316 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
FOXG1P55316 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC6.5□□□□□ -1.37
FOXG1P55316 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
FOXG1P55316 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
FOXG1P55316 LRRC37A9P-201ENST00000603850 5376 ntBASIC6.49□□□□□ -1.37
FOXG1P55316 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC6.49□□□□□ -1.37
FOXG1P55316 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC6.49□□□□□ -1.37
FOXG1P55316 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC6.49□□□□□ -1.37
FOXG1P55316 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
FOXG1P55316 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC6.49□□□□□ -1.37
FOXG1P55316 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC6.49□□□□□ -1.37
FOXG1P55316 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC6.49□□□□□ -1.37
FOXG1P55316 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
FOXG1P55316 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.49□□□□□ -1.37
FOXG1P55316 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
FOXG1P55316 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
FOXG1P55316 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
FOXG1P55316 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms