Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
LINC00346Q8IVM7 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC6.63□□□□□ -1.35
LINC00346Q8IVM7 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
LINC00346Q8IVM7 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
LINC00346Q8IVM7 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
LINC00346Q8IVM7 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
LINC00346Q8IVM7 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
LINC00346Q8IVM7 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
LINC00346Q8IVM7 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
LINC00346Q8IVM7 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
LINC00346Q8IVM7 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 TRIM51FP-201ENST00000526452 1353 ntBASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 AC092952.1-201ENST00000397646 1209 ntBASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 LINC01392-201ENST00000419883 565 ntTSL 5 BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 RPL35P8-201ENST00000433284 337 ntBASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 AP006193.1-201ENST00000440724 485 ntBASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 AC074257.1-201ENST00000446340 585 ntTSL 4 BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 RN7SL233P-201ENST00000469988 277 ntBASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 AC114300.1-201ENST00000502347 280 ntBASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 AC093821.1-201ENST00000503950 539 ntTSL 4 BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 LINC02200-203ENST00000513687 541 ntTSL 3 BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 RNU4-18P-201ENST00000516751 149 ntBASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 AC022639.1-201ENST00000523191 573 ntTSL 4 BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 AP001782.1-202ENST00000527774 445 ntTSL 3 BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 SUPT16H-204ENST00000555943 915 ntTSL 2 BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 IGHV1OR15-3-201ENST00000564926 351 ntBASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 SPINT1-AS1-204ENST00000568419 629 ntTSL 3 BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 AC061975.4-201ENST00000578466 776 ntTSL 3 BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 MIR3689F-201ENST00000579617 66 ntBASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 ANKRD20A19P-203ENST00000602724 295 ntBASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 AC079414.3-201ENST00000612986 1090 ntBASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 KRTAP4-1-202ENST00000620667 737 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 AC090099.1-204ENST00000623626 849 ntBASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 AL133320.1-201ENST00000621423 2352 ntBASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 AC007938.1-201ENST00000562524 2902 ntBASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LINC00346Q8IVM7 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 OR5AQ1P-202ENST00000641257 1534 ntBASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 EEF1A1P15-201ENST00000395772 1408 ntBASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 LIPF-202ENST00000355843 1357 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 FAM122C-202ENST00000370785 1344 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 PHACTR1-204ENST00000379348 795 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 SNORA68-201ENST00000384437 133 ntBASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 CRIP1P3-201ENST00000416794 220 ntBASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 EEF1A1P27-201ENST00000429983 1135 ntBASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 TULP3P1-201ENST00000442322 816 ntTSL 3 BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 RPL4P2-201ENST00000447259 1282 ntBASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 OR7E102P-201ENST00000448855 1015 ntBASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 PRKG1-AS1-203ENST00000452247 886 ntTSL 5 BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 AC234771.3-201ENST00000454984 622 ntBASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 RNU7-157P-201ENST00000459600 66 ntBASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 AC018816.1-206ENST00000474544 455 ntTSL 3 BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 AP004833.1-201ENST00000507987 1238 ntBASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 AC100823.2-201ENST00000518337 699 ntBASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.61□□□□□ -1.35
LINC00346Q8IVM7 PTTG3P-201ENST00000521862 606 ntBASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms