RNA–Protein interactions for RNA: ENST00000513687.1

LINC02200-203, Transcript of long intergenic non-protein coding RNA 2200, humanhuman

TSL 3 BASIC

Gene LINC02200, Length 541 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02200-203ENST00000513687 AEBP2Q6ZN18 517 aaPredicted RBP27.45■■□□□ 1.98
LINC02200-203ENST00000513687 CHIC1Q5VXU3 224 aa26.53■■□□□ 1.84
LINC02200-203ENST00000513687 SENP3Q9H4L4 574 aaPredicted RBP23.47■■□□□ 1.35
LINC02200-203ENST00000513687 PHF23Q9BUL5 403 aaPredicted RBP23.21■■□□□ 1.31
LINC02200-203ENST00000513687 FOXD1Q16676 465 aa21.73■■□□□ 1.07
LINC02200-203ENST00000513687 PLPPR3Q6T4P5 718 aa21.4■■□□□ 1.02
LINC02200-203ENST00000513687 PPP6R1Q9UPN7 881 aa20.56■□□□□ 0.88
LINC02200-203ENST00000513687 ADRA2BP18089 450 aa20.52■□□□□ 0.88
LINC02200-203ENST00000513687 PIAS4Q8N2W9 510 aaPredicted RBP20.43■□□□□ 0.86
LINC02200-203ENST00000513687 MSH5O43196 834 aa20.29■□□□□ 0.84
LINC02200-203ENST00000513687 NISCHQ9Y2I1 1504 aa19.5■□□□□ 0.71
LINC02200-203ENST00000513687 POTEDQ86YR6 584 aa19.04■□□□□ 0.64
LINC02200-203ENST00000513687 SCAF1Q9H7N4 1312 aaKnown RBP18.91■□□□□ 0.62
LINC02200-203ENST00000513687 PPP4R3CPQ6ZMV5 832 aa18.75■□□□□ 0.59
LINC02200-203ENST00000513687 MAPK8IP2Q13387 824 aaPredicted RBP18.69■□□□□ 0.58
LINC02200-203ENST00000513687 DMRT2Q9Y5R5 561 aa18.65■□□□□ 0.58
LINC02200-203ENST00000513687 CNKSR2Q8WXI2 1034 aa18.36■□□□□ 0.53
LINC02200-203ENST00000513687 NCBP3Q53F19 620 aaKnown RBP18.22■□□□□ 0.51
LINC02200-203ENST00000513687 HOXD11P31277 338 aaPredicted RBP18.13■□□□□ 0.49
LINC02200-203ENST00000513687 RNF216Q9NWF9 866 aaPredicted RBP18.11■□□□□ 0.49
LINC02200-203ENST00000513687 NPM3O75607 178 aaKnown RBP17.89■□□□□ 0.45
LINC02200-203ENST00000513687 KCNA4P22459 653 aa17.87■□□□□ 0.45
LINC02200-203ENST00000513687 DCAF8L1A6NGE4 600 aa17.77■□□□□ 0.44
LINC02200-203ENST00000513687 DNAJC5BQ9UF47 199 aa17.58■□□□□ 0.4
LINC02200-203ENST00000513687 CCDC180Q9P1Z9 1646 aa17.47■□□□□ 0.39
LINC02200-203ENST00000513687 ABCC9O60706 1549 aa17.42■□□□□ 0.38
LINC02200-203ENST00000513687 RNF39Q9H2S5 420 aa17.31■□□□□ 0.36
LINC02200-203ENST00000513687 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.22■□□□□ 0.35
LINC02200-203ENST00000513687 C1QBPQ07021 282 aaKnown RBP17.11■□□□□ 0.33
LINC02200-203ENST00000513687 CACNB1Q02641 598 aaPredicted RBP17.08■□□□□ 0.32
LINC02200-203ENST00000513687 SLC4A1APQ9BWU0 796 aaKnown RBP16.98■□□□□ 0.31
LINC02200-203ENST00000513687 SLC4A2P04920 1241 aa16.97■□□□□ 0.31
LINC02200-203ENST00000513687 U3KPZ7 1027 aaPredicted RBP16.92■□□□□ 0.3
LINC02200-203ENST00000513687 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.67■□□□□ 0.26
LINC02200-203ENST00000513687 HNRNPUL2Q1KMD3 747 aaKnown RBP16.67■□□□□ 0.26
LINC02200-203ENST00000513687 RB1CC1Q8TDY2 1594 aa16.66■□□□□ 0.26
LINC02200-203ENST00000513687 FOXD4L1Q9NU39 408 aa16.64■□□□□ 0.25
LINC02200-203ENST00000513687 APLP2Q06481 763 aa16.62■□□□□ 0.25
LINC02200-203ENST00000513687 MYCNP04198 464 aaPredicted RBP16.61■□□□□ 0.25
LINC02200-203ENST00000513687 DCAF8L2P0C7V8 631 aa16.58■□□□□ 0.24
LINC02200-203ENST00000513687 NACADO15069 1562 aa16.57■□□□□ 0.24
LINC02200-203ENST00000513687 SAMD1Q6SPF0 538 aaPredicted RBP16.57■□□□□ 0.24
LINC02200-203ENST00000513687 SPINK5Q9NQ38 1064 aaPredicted RBP16.5■□□□□ 0.23
LINC02200-203ENST00000513687 CAPN15O75808 1086 aa16.48■□□□□ 0.23
LINC02200-203ENST00000513687 ZBTB22O15209 634 aa16.42■□□□□ 0.22
LINC02200-203ENST00000513687 ZNF219Q9P2Y4 722 aaPredicted RBP16.4■□□□□ 0.22
LINC02200-203ENST00000513687 MYO15BQ96JP2 1530 aa16.36■□□□□ 0.21
LINC02200-203ENST00000513687 DSG3P32926 999 aa16.32■□□□□ 0.2
LINC02200-203ENST00000513687 TRHP20396 242 aaPredicted RBP16.29■□□□□ 0.2
LINC02200-203ENST00000513687 PABPN1Q86U42 306 aaKnown RBP eCLIP16.27■□□□□ 0.2
LINC02200-203ENST00000513687 DCAF1Q9Y4B6 1507 aa16.14■□□□□ 0.18
LINC02200-203ENST00000513687 UNC13AQ9UPW8 1703 aa16.14■□□□□ 0.17
LINC02200-203ENST00000513687 ATXN8OSP0DMR3 200 aa16.13■□□□□ 0.17
LINC02200-203ENST00000513687 ZCCHC6Q5VYS8 1495 aaKnown RBP16.13■□□□□ 0.17
LINC02200-203ENST00000513687 ABCB7O75027 752 aa16.1■□□□□ 0.17
LINC02200-203ENST00000513687 ATF5Q9Y2D1 282 aaPredicted RBP16.06■□□□□ 0.16
LINC02200-203ENST00000513687 BICRAQ9NZM4 1560 aa16.04■□□□□ 0.16
LINC02200-203ENST00000513687 CSRNP3Q8WYN3 585 aa16.03■□□□□ 0.16
LINC02200-203ENST00000513687 EHMT2Q96KQ7 1210 aa16.01■□□□□ 0.15
LINC02200-203ENST00000513687 SHROOM4Q9ULL8 1493 aa16■□□□□ 0.15
LINC02200-203ENST00000513687 POLA2Q14181 598 aa15.95■□□□□ 0.14
LINC02200-203ENST00000513687 SCRIBQ14160 1630 aa15.86■□□□□ 0.13
LINC02200-203ENST00000513687 ZBTB12Q9Y330 459 aaPredicted RBP15.81■□□□□ 0.12
LINC02200-203ENST00000513687 CECR2Q9BXF3 1484 aa15.73■□□□□ 0.11
LINC02200-203ENST00000513687 CC2D2AQ9P2K1 1620 aa15.73■□□□□ 0.11
LINC02200-203ENST00000513687 EIF4G1Q04637 1599 aaKnown RBP15.71■□□□□ 0.11
LINC02200-203ENST00000513687 RBM42Q9BTD8 480 aaKnown RBP15.66■□□□□ 0.1
LINC02200-203ENST00000513687 FBLN2P98095 1184 aa15.52■□□□□ 0.08
LINC02200-203ENST00000513687 OSCARQ8IYS5 282 aa15.46■□□□□ 0.07
LINC02200-203ENST00000513687 MKRN4PQ13434 485 aaPredicted RBP15.39■□□□□ 0.05
LINC02200-203ENST00000513687 AKT1S1Q96B36 256 aa15.34■□□□□ 0.05
LINC02200-203ENST00000513687 SPDYE2BA6NHP3 402 aa15.31■□□□□ 0.04
LINC02200-203ENST00000513687 SPDYE6P0CI01 402 aa15.31■□□□□ 0.04
LINC02200-203ENST00000513687 SPDYE2Q495Y8 402 aa15.31■□□□□ 0.04
LINC02200-203ENST00000513687 NCAPD3P42695 1498 aa15.29■□□□□ 0.04
LINC02200-203ENST00000513687 SMARCA2P51531 1590 aa15.22■□□□□ 0.03
LINC02200-203ENST00000513687 ATAD2BQ9ULI0 1458 aa15.21■□□□□ 0.03
LINC02200-203ENST00000513687 BAZ1AQ9NRL2 1556 aaPredicted RBP15.16■□□□□ 0.02
LINC02200-203ENST00000513687 SMARCA4P51532 1647 aa15.16■□□□□ 0.02
LINC02200-203ENST00000513687 SSUH2Q9Y2M2 353 aa15.14■□□□□ 0.01
LINC02200-203ENST00000513687 HMGXB3Q12766 1538 aa15.13■□□□□ 0.01
LINC02200-203ENST00000513687 REM2Q8IYK8 340 aaPredicted RBP15.13■□□□□ 0.01
LINC02200-203ENST00000513687 ERCC6Q03468 1493 aa15.13■□□□□ 0.01
LINC02200-203ENST00000513687 ZNF692Q9BU19 519 aaPredicted RBP15.11■□□□□ 0.01
LINC02200-203ENST00000513687 BAZ1BQ9UIG0 1483 aaKnown RBP15.09■□□□□ 0.01
LINC02200-203ENST00000513687 CUX2O14529 1486 aa15.08■□□□□ 0
LINC02200-203ENST00000513687 CHRDL2Q6WN34 429 aa15.07■□□□□ 0
LINC02200-203ENST00000513687 DNAJC5Q9H3Z4 198 aa15.07■□□□□ 0
LINC02200-203ENST00000513687 PEG3Q9GZU2 1588 aa15.04■□□□□ -0
LINC02200-203ENST00000513687 POTEHQ6S545 545 aa15.01□□□□□ -0.01
LINC02200-203ENST00000513687 PITPNM1O00562 1244 aa14.98□□□□□ -0.01
LINC02200-203ENST00000513687 MROH2BQ7Z745 1585 aa14.97□□□□□ -0.01
LINC02200-203ENST00000513687 LAMC3Q9Y6N6 1575 aa14.94□□□□□ -0.02
LINC02200-203ENST00000513687 SPDYE1Q8NFV5 336 aaPredicted RBP14.93□□□□□ -0.02
LINC02200-203ENST00000513687 NESP48681 1621 aa14.92□□□□□ -0.02
LINC02200-203ENST00000513687 PDS5BQ9NTI5 1447 aa14.92□□□□□ -0.02
LINC02200-203ENST00000513687 SPDYE4A6NLX3 237 aa14.89□□□□□ -0.03
LINC02200-203ENST00000513687 CADPSQ9ULU8 1353 aa14.85□□□□□ -0.03
LINC02200-203ENST00000513687 FXR2P51116 673 aaKnown RBP eCLIP14.79□□□□□ -0.04
LINC02200-203ENST00000513687 CLEC11AQ9Y240 323 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms