Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AL356311.1-201ENST00000451697 258 ntTSL 3 BASIC7.82□□□□□ -1.16
NEK3P51956 RN7SL19P-201ENST00000462522 306 ntBASIC7.82□□□□□ -1.16
NEK3P51956 NDUFS5P2-201ENST00000484004 306 ntBASIC7.82□□□□□ -1.16
NEK3P51956 MTND3P6-201ENST00000485242 339 ntBASIC7.82□□□□□ -1.16
NEK3P51956 LINC01096-201ENST00000501050 1263 ntTSL 2 BASIC7.82□□□□□ -1.16
NEK3P51956 AC233724.1-201ENST00000503894 233 ntBASIC7.82□□□□□ -1.16
NEK3P51956 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC7.82□□□□□ -1.16
NEK3P51956 EIF3KP1-201ENST00000513279 656 ntBASIC7.82□□□□□ -1.16
NEK3P51956 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC7.82□□□□□ -1.16
NEK3P51956 AC090589.2-201ENST00000532022 332 ntTSL 3 BASIC7.82□□□□□ -1.16
NEK3P51956 AP003174.3-201ENST00000537926 516 ntBASIC7.82□□□□□ -1.16
NEK3P51956 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC7.82□□□□□ -1.16
NEK3P51956 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
NEK3P51956 HIGD1AP9-201ENST00000550710 279 ntBASIC7.82□□□□□ -1.16
NEK3P51956 TMX3-204ENST00000562706 937 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
NEK3P51956 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC7.82□□□□□ -1.16
NEK3P51956 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC7.82□□□□□ -1.16
NEK3P51956 AC090415.1-201ENST00000581877 847 ntBASIC7.82□□□□□ -1.16
NEK3P51956 STARD6-204ENST00000584040 660 ntTSL 3 BASIC7.82□□□□□ -1.16
NEK3P51956 BOLA2P1-201ENST00000584794 232 ntBASIC7.82□□□□□ -1.16
NEK3P51956 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC7.82□□□□□ -1.16
NEK3P51956 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC7.82□□□□□ -1.16
NEK3P51956 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NEK3P51956 SLC20A1P2-201ENST00000618036 966 ntBASIC7.82□□□□□ -1.16
NEK3P51956 AL109954.1-201ENST00000619495 557 ntTSL 4 BASIC7.82□□□□□ -1.16
NEK3P51956 AC068234.2-201ENST00000619646 522 ntBASIC7.82□□□□□ -1.16
NEK3P51956 AC087072.2-201ENST00000621060 682 ntBASIC7.82□□□□□ -1.16
NEK3P51956 AC099667.1-201ENST00000624222 469 ntBASIC7.82□□□□□ -1.16
NEK3P51956 AC024475.4-201ENST00000635144 1206 ntTSL 5 BASIC7.82□□□□□ -1.16
NEK3P51956 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
NEK3P51956 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC7.82□□□□□ -1.16
NEK3P51956 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
NEK3P51956 BX322650.1-201ENST00000332359 2143 ntBASIC7.82□□□□□ -1.16
NEK3P51956 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
NEK3P51956 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NEK3P51956 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NEK3P51956 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NEK3P51956 LINC02408-201ENST00000400306 1766 ntTSL 2 BASIC7.82□□□□□ -1.16
NEK3P51956 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.82□□□□□ -1.16
NEK3P51956 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
NEK3P51956 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
NEK3P51956 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
NEK3P51956 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NEK3P51956 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC7.81□□□□□ -1.16
NEK3P51956 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
NEK3P51956 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.81□□□□□ -1.16
NEK3P51956 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC7.81□□□□□ -1.16
NEK3P51956 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC7.81□□□□□ -1.16
NEK3P51956 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NEK3P51956 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
NEK3P51956 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
NEK3P51956 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
NEK3P51956 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NEK3P51956 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NEK3P51956 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
NEK3P51956 TFDP2-212ENST00000486111 2360 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
NEK3P51956 SYTL2-228ENST00000533892 1441 ntTSL 2 BASIC7.81□□□□□ -1.16
NEK3P51956 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC7.81□□□□□ -1.16
NEK3P51956 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
NEK3P51956 SCGB2A2-201ENST00000227918 505 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NEK3P51956 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
NEK3P51956 SNORA10B-201ENST00000384458 133 ntBASIC7.81□□□□□ -1.16
NEK3P51956 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NEK3P51956 BCL2L15-202ENST00000393316 1084 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NEK3P51956 KRT18P52-201ENST00000404956 846 ntBASIC7.81□□□□□ -1.16
NEK3P51956 RPL5P6-201ENST00000425640 886 ntBASIC7.81□□□□□ -1.16
NEK3P51956 NPM1P25-201ENST00000429734 854 ntBASIC7.81□□□□□ -1.16
NEK3P51956 AC000362.1-201ENST00000433725 425 ntBASIC7.81□□□□□ -1.16
NEK3P51956 PHBP4-201ENST00000437447 837 ntBASIC7.81□□□□□ -1.16
NEK3P51956 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC7.81□□□□□ -1.16
NEK3P51956 C1orf112-208ENST00000496973 782 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
NEK3P51956 AC146944.2-201ENST00000504546 1073 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NEK3P51956 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC7.81□□□□□ -1.16
NEK3P51956 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC7.81□□□□□ -1.16
NEK3P51956 ENPP7P3-201ENST00000509123 241 ntBASIC7.81□□□□□ -1.16
NEK3P51956 AC139495.1-201ENST00000510264 1073 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NEK3P51956 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC7.81□□□□□ -1.16
NEK3P51956 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC7.81□□□□□ -1.16
NEK3P51956 CHCHD3P2-201ENST00000550751 639 ntBASIC7.81□□□□□ -1.16
NEK3P51956 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC7.81□□□□□ -1.16
NEK3P51956 AC026254.4-201ENST00000581118 454 ntTSL 2 BASIC7.81□□□□□ -1.16
NEK3P51956 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC7.81□□□□□ -1.16
NEK3P51956 AL021918.1-201ENST00000603933 236 ntBASIC7.81□□□□□ -1.16
NEK3P51956 AC012511.1-201ENST00000608140 449 ntBASIC7.81□□□□□ -1.16
NEK3P51956 KRTAP4-1-202ENST00000620667 737 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NEK3P51956 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC7.81□□□□□ -1.16
NEK3P51956 AC139426.3-201ENST00000605648 2059 ntBASIC7.81□□□□□ -1.16
NEK3P51956 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NEK3P51956 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NEK3P51956 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC7.81□□□□□ -1.16
NEK3P51956 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
NEK3P51956 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NEK3P51956 LIPF-202ENST00000355843 1357 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NEK3P51956 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NEK3P51956 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC7.81□□□□□ -1.16
NEK3P51956 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NEK3P51956 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
NEK3P51956 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC7.81□□□□□ -1.16
NEK3P51956 OR7E11P-202ENST00000642027 1491 ntBASIC7.81□□□□□ -1.16
NEK3P51956 MRPS17P1-201ENST00000596009 3130 ntBASIC7.81□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms