Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP4B1Q9Y6B7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
AP4B1Q9Y6B7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP4B1Q9Y6B7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.21■□□□□ 0.67
AP4B1Q9Y6B7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP4B1Q9Y6B7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
AP4B1Q9Y6B7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP4B1Q9Y6B7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP4B1Q9Y6B7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
AP4B1Q9Y6B7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
AP4B1Q9Y6B7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP4B1Q9Y6B7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
AP4B1Q9Y6B7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.21■□□□□ 0.67
AP4B1Q9Y6B7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.21■□□□□ 0.67
AP4B1Q9Y6B7 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.21■□□□□ 0.67
AP4B1Q9Y6B7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.21■□□□□ 0.67
AP4B1Q9Y6B7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.21■□□□□ 0.67
AP4B1Q9Y6B7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP4B1Q9Y6B7 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP4B1Q9Y6B7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.21■□□□□ 0.67
AP4B1Q9Y6B7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
AP4B1Q9Y6B7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
AP4B1Q9Y6B7 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP4B1Q9Y6B7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP4B1Q9Y6B7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.21■□□□□ 0.67
AP4B1Q9Y6B7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP4B1Q9Y6B7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP4B1Q9Y6B7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP4B1Q9Y6B7 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
AP4B1Q9Y6B7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP4B1Q9Y6B7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
AP4B1Q9Y6B7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
AP4B1Q9Y6B7 AC004854.2-201ENST00000608450 1441 ntBASIC19.2■□□□□ 0.66
AP4B1Q9Y6B7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.2■□□□□ 0.66
AP4B1Q9Y6B7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP4B1Q9Y6B7 KRT19P1-201ENST00000405746 1186 ntBASIC19.2■□□□□ 0.66
AP4B1Q9Y6B7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
AP4B1Q9Y6B7 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.2■□□□□ 0.66
AP4B1Q9Y6B7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.2■□□□□ 0.66
AP4B1Q9Y6B7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.2■□□□□ 0.66
AP4B1Q9Y6B7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP4B1Q9Y6B7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.2■□□□□ 0.66
AP4B1Q9Y6B7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
AP4B1Q9Y6B7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP4B1Q9Y6B7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP4B1Q9Y6B7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP4B1Q9Y6B7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
AP4B1Q9Y6B7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
AP4B1Q9Y6B7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
AP4B1Q9Y6B7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
AP4B1Q9Y6B7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP4B1Q9Y6B7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.19■□□□□ 0.66
AP4B1Q9Y6B7 AC005332.7-201ENST00000614046 2005 ntBASIC19.19■□□□□ 0.66
AP4B1Q9Y6B7 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP4B1Q9Y6B7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
AP4B1Q9Y6B7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.19■□□□□ 0.66
AP4B1Q9Y6B7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.19■□□□□ 0.66
AP4B1Q9Y6B7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
AP4B1Q9Y6B7 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
AP4B1Q9Y6B7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
AP4B1Q9Y6B7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
AP4B1Q9Y6B7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP4B1Q9Y6B7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.19■□□□□ 0.66
AP4B1Q9Y6B7 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP4B1Q9Y6B7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP4B1Q9Y6B7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
AP4B1Q9Y6B7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP4B1Q9Y6B7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
AP4B1Q9Y6B7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.19■□□□□ 0.66
AP4B1Q9Y6B7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
AP4B1Q9Y6B7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.18■□□□□ 0.66
AP4B1Q9Y6B7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.18■□□□□ 0.66
AP4B1Q9Y6B7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP4B1Q9Y6B7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
AP4B1Q9Y6B7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP4B1Q9Y6B7 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
AP4B1Q9Y6B7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP4B1Q9Y6B7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.18■□□□□ 0.66
AP4B1Q9Y6B7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP4B1Q9Y6B7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
AP4B1Q9Y6B7 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP4B1Q9Y6B7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP4B1Q9Y6B7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.18■□□□□ 0.66
AP4B1Q9Y6B7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
AP4B1Q9Y6B7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.18■□□□□ 0.66
AP4B1Q9Y6B7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.18■□□□□ 0.66
AP4B1Q9Y6B7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP4B1Q9Y6B7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP4B1Q9Y6B7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP4B1Q9Y6B7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP4B1Q9Y6B7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
AP4B1Q9Y6B7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP4B1Q9Y6B7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP4B1Q9Y6B7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP4B1Q9Y6B7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP4B1Q9Y6B7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
AP4B1Q9Y6B7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
AP4B1Q9Y6B7 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
AP4B1Q9Y6B7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.17■□□□□ 0.66
AP4B1Q9Y6B7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms