Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
YIPF1Q9Y548 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.05■□□□□ 0.96
YIPF1Q9Y548 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.05■□□□□ 0.96
YIPF1Q9Y548 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
YIPF1Q9Y548 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
YIPF1Q9Y548 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.05■□□□□ 0.96
YIPF1Q9Y548 MIR4785-201ENST00000585005 73 ntBASIC21.05■□□□□ 0.96
YIPF1Q9Y548 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
YIPF1Q9Y548 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
YIPF1Q9Y548 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
YIPF1Q9Y548 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
YIPF1Q9Y548 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
YIPF1Q9Y548 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
YIPF1Q9Y548 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
YIPF1Q9Y548 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
YIPF1Q9Y548 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
YIPF1Q9Y548 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.04■□□□□ 0.96
YIPF1Q9Y548 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
YIPF1Q9Y548 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
YIPF1Q9Y548 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.04■□□□□ 0.96
YIPF1Q9Y548 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
YIPF1Q9Y548 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
YIPF1Q9Y548 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
YIPF1Q9Y548 KRT16P5-201ENST00000455284 522 ntBASIC21.04■□□□□ 0.96
YIPF1Q9Y548 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.04■□□□□ 0.96
YIPF1Q9Y548 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
YIPF1Q9Y548 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.04■□□□□ 0.96
YIPF1Q9Y548 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.04■□□□□ 0.96
YIPF1Q9Y548 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.04■□□□□ 0.96
YIPF1Q9Y548 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.04■□□□□ 0.96
YIPF1Q9Y548 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
YIPF1Q9Y548 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.04■□□□□ 0.96
YIPF1Q9Y548 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
YIPF1Q9Y548 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.04■□□□□ 0.96
YIPF1Q9Y548 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.04■□□□□ 0.96
YIPF1Q9Y548 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
YIPF1Q9Y548 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
YIPF1Q9Y548 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.04■□□□□ 0.96
YIPF1Q9Y548 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
YIPF1Q9Y548 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.04■□□□□ 0.96
YIPF1Q9Y548 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
YIPF1Q9Y548 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.04■□□□□ 0.96
YIPF1Q9Y548 HTR7P1-201ENST00000538670 1336 ntBASIC21.04■□□□□ 0.96
YIPF1Q9Y548 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
YIPF1Q9Y548 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
YIPF1Q9Y548 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
YIPF1Q9Y548 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
YIPF1Q9Y548 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
YIPF1Q9Y548 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
YIPF1Q9Y548 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
YIPF1Q9Y548 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.03■□□□□ 0.96
YIPF1Q9Y548 BX088651.1-201ENST00000540551 451 ntBASIC21.03■□□□□ 0.96
YIPF1Q9Y548 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.03■□□□□ 0.96
YIPF1Q9Y548 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
YIPF1Q9Y548 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
YIPF1Q9Y548 AC005229.4-201ENST00000610085 2198 ntBASIC21.03■□□□□ 0.96
YIPF1Q9Y548 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
YIPF1Q9Y548 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.03■□□□□ 0.96
YIPF1Q9Y548 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.03■□□□□ 0.96
YIPF1Q9Y548 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
YIPF1Q9Y548 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
YIPF1Q9Y548 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
YIPF1Q9Y548 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
YIPF1Q9Y548 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
YIPF1Q9Y548 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.02■□□□□ 0.96
YIPF1Q9Y548 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.02■□□□□ 0.96
YIPF1Q9Y548 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.02■□□□□ 0.96
YIPF1Q9Y548 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.02■□□□□ 0.96
YIPF1Q9Y548 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.02■□□□□ 0.96
YIPF1Q9Y548 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
YIPF1Q9Y548 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
YIPF1Q9Y548 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
YIPF1Q9Y548 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.01■□□□□ 0.95
YIPF1Q9Y548 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
YIPF1Q9Y548 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
YIPF1Q9Y548 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
YIPF1Q9Y548 KRT8P17-201ENST00000453110 1448 ntBASIC21.01■□□□□ 0.95
YIPF1Q9Y548 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.01■□□□□ 0.95
YIPF1Q9Y548 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
YIPF1Q9Y548 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
YIPF1Q9Y548 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
YIPF1Q9Y548 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
YIPF1Q9Y548 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21■□□□□ 0.95
YIPF1Q9Y548 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
YIPF1Q9Y548 DPP3P2-201ENST00000416030 1696 ntBASIC21■□□□□ 0.95
YIPF1Q9Y548 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
YIPF1Q9Y548 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
YIPF1Q9Y548 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21■□□□□ 0.95
YIPF1Q9Y548 AF186192.3-201ENST00000583427 947 ntBASIC21■□□□□ 0.95
YIPF1Q9Y548 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
YIPF1Q9Y548 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
YIPF1Q9Y548 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21■□□□□ 0.95
YIPF1Q9Y548 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
YIPF1Q9Y548 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
YIPF1Q9Y548 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
YIPF1Q9Y548 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.99■□□□□ 0.95
YIPF1Q9Y548 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
YIPF1Q9Y548 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
YIPF1Q9Y548 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
YIPF1Q9Y548 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms