Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
SSX2IPQ9Y2D8 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SSX2IPQ9Y2D8 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SSX2IPQ9Y2D8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.58■■□□□ 1.05
SSX2IPQ9Y2D8 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SSX2IPQ9Y2D8 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SSX2IPQ9Y2D8 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
SSX2IPQ9Y2D8 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SSX2IPQ9Y2D8 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SSX2IPQ9Y2D8 KRASP1-201ENST00000407852 552 ntBASIC21.58■■□□□ 1.05
SSX2IPQ9Y2D8 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.58■■□□□ 1.05
SSX2IPQ9Y2D8 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.58■■□□□ 1.05
SSX2IPQ9Y2D8 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SSX2IPQ9Y2D8 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
SSX2IPQ9Y2D8 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
SSX2IPQ9Y2D8 REXO1L12P-201ENST00000622156 912 ntBASIC21.58■■□□□ 1.05
SSX2IPQ9Y2D8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SSX2IPQ9Y2D8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
SSX2IPQ9Y2D8 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.58■■□□□ 1.04
SSX2IPQ9Y2D8 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
SSX2IPQ9Y2D8 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SSX2IPQ9Y2D8 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SSX2IPQ9Y2D8 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
SSX2IPQ9Y2D8 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SSX2IPQ9Y2D8 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SSX2IPQ9Y2D8 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SSX2IPQ9Y2D8 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SSX2IPQ9Y2D8 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SSX2IPQ9Y2D8 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
SSX2IPQ9Y2D8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SSX2IPQ9Y2D8 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SSX2IPQ9Y2D8 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.57■■□□□ 1.04
SSX2IPQ9Y2D8 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.57■■□□□ 1.04
SSX2IPQ9Y2D8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.57■■□□□ 1.04
SSX2IPQ9Y2D8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SSX2IPQ9Y2D8 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.57■■□□□ 1.04
SSX2IPQ9Y2D8 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SSX2IPQ9Y2D8 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.57■■□□□ 1.04
SSX2IPQ9Y2D8 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.57■■□□□ 1.04
SSX2IPQ9Y2D8 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SSX2IPQ9Y2D8 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
SSX2IPQ9Y2D8 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SSX2IPQ9Y2D8 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.56■■□□□ 1.04
SSX2IPQ9Y2D8 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.56■■□□□ 1.04
SSX2IPQ9Y2D8 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
SSX2IPQ9Y2D8 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SSX2IPQ9Y2D8 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.56■■□□□ 1.04
SSX2IPQ9Y2D8 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.56■■□□□ 1.04
SSX2IPQ9Y2D8 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.56■■□□□ 1.04
SSX2IPQ9Y2D8 RARRES2P10-201ENST00000564312 460 ntBASIC21.56■■□□□ 1.04
SSX2IPQ9Y2D8 AL049637.2-201ENST00000641778 930 ntBASIC21.56■■□□□ 1.04
SSX2IPQ9Y2D8 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SSX2IPQ9Y2D8 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SSX2IPQ9Y2D8 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SSX2IPQ9Y2D8 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SSX2IPQ9Y2D8 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SSX2IPQ9Y2D8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.55■■□□□ 1.04
SSX2IPQ9Y2D8 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.55■■□□□ 1.04
SSX2IPQ9Y2D8 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SSX2IPQ9Y2D8 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SSX2IPQ9Y2D8 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.55■■□□□ 1.04
SSX2IPQ9Y2D8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SSX2IPQ9Y2D8 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SSX2IPQ9Y2D8 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SSX2IPQ9Y2D8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SSX2IPQ9Y2D8 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SSX2IPQ9Y2D8 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SSX2IPQ9Y2D8 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SSX2IPQ9Y2D8 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.55■■□□□ 1.04
SSX2IPQ9Y2D8 AC023632.3-201ENST00000521633 145 ntBASIC21.55■■□□□ 1.04
SSX2IPQ9Y2D8 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.55■■□□□ 1.04
SSX2IPQ9Y2D8 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SSX2IPQ9Y2D8 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SSX2IPQ9Y2D8 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.55■■□□□ 1.04
SSX2IPQ9Y2D8 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SSX2IPQ9Y2D8 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.55■■□□□ 1.04
SSX2IPQ9Y2D8 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SSX2IPQ9Y2D8 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SSX2IPQ9Y2D8 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SSX2IPQ9Y2D8 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
SSX2IPQ9Y2D8 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SSX2IPQ9Y2D8 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.54■■□□□ 1.04
SSX2IPQ9Y2D8 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.54■■□□□ 1.04
SSX2IPQ9Y2D8 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SSX2IPQ9Y2D8 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SSX2IPQ9Y2D8 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SSX2IPQ9Y2D8 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
SSX2IPQ9Y2D8 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
SSX2IPQ9Y2D8 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SSX2IPQ9Y2D8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SSX2IPQ9Y2D8 MIR4785-201ENST00000585005 73 ntBASIC21.54■■□□□ 1.04
SSX2IPQ9Y2D8 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
SSX2IPQ9Y2D8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SSX2IPQ9Y2D8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.54■■□□□ 1.04
SSX2IPQ9Y2D8 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SSX2IPQ9Y2D8 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SSX2IPQ9Y2D8 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SSX2IPQ9Y2D8 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SSX2IPQ9Y2D8 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
SSX2IPQ9Y2D8 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms