Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CTSFQ9UBX1 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTSFQ9UBX1 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.9■□□□□ 0.62
CTSFQ9UBX1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.9■□□□□ 0.62
CTSFQ9UBX1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.9■□□□□ 0.62
CTSFQ9UBX1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CTSFQ9UBX1 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.9■□□□□ 0.62
CTSFQ9UBX1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.9■□□□□ 0.62
CTSFQ9UBX1 AP006294.2-201ENST00000641667 209 ntBASIC18.9■□□□□ 0.62
CTSFQ9UBX1 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTSFQ9UBX1 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTSFQ9UBX1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTSFQ9UBX1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CTSFQ9UBX1 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
CTSFQ9UBX1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTSFQ9UBX1 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.9■□□□□ 0.62
CTSFQ9UBX1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.9■□□□□ 0.62
CTSFQ9UBX1 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.9■□□□□ 0.62
CTSFQ9UBX1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CTSFQ9UBX1 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTSFQ9UBX1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CTSFQ9UBX1 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTSFQ9UBX1 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.89■□□□□ 0.61
CTSFQ9UBX1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.89■□□□□ 0.61
CTSFQ9UBX1 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTSFQ9UBX1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTSFQ9UBX1 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CTSFQ9UBX1 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTSFQ9UBX1 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.89■□□□□ 0.61
CTSFQ9UBX1 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTSFQ9UBX1 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.89■□□□□ 0.61
CTSFQ9UBX1 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.89■□□□□ 0.61
CTSFQ9UBX1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTSFQ9UBX1 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CTSFQ9UBX1 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
CTSFQ9UBX1 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.89■□□□□ 0.61
CTSFQ9UBX1 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CTSFQ9UBX1 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.89■□□□□ 0.61
CTSFQ9UBX1 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CTSFQ9UBX1 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.89■□□□□ 0.61
CTSFQ9UBX1 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.89■□□□□ 0.61
CTSFQ9UBX1 AL023875.1-201ENST00000640777 796 ntBASIC18.89■□□□□ 0.61
CTSFQ9UBX1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTSFQ9UBX1 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CTSFQ9UBX1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTSFQ9UBX1 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTSFQ9UBX1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CTSFQ9UBX1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTSFQ9UBX1 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTSFQ9UBX1 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTSFQ9UBX1 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTSFQ9UBX1 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTSFQ9UBX1 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.88■□□□□ 0.61
CTSFQ9UBX1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTSFQ9UBX1 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTSFQ9UBX1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTSFQ9UBX1 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTSFQ9UBX1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTSFQ9UBX1 UBE2SP1-201ENST00000450587 669 ntBASIC18.88■□□□□ 0.61
CTSFQ9UBX1 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.88■□□□□ 0.61
CTSFQ9UBX1 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.88■□□□□ 0.61
CTSFQ9UBX1 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTSFQ9UBX1 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.88■□□□□ 0.61
CTSFQ9UBX1 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTSFQ9UBX1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.88■□□□□ 0.61
CTSFQ9UBX1 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.88■□□□□ 0.61
CTSFQ9UBX1 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTSFQ9UBX1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTSFQ9UBX1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.88■□□□□ 0.61
CTSFQ9UBX1 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.88■□□□□ 0.61
CTSFQ9UBX1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.88■□□□□ 0.61
CTSFQ9UBX1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CTSFQ9UBX1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.88■□□□□ 0.61
CTSFQ9UBX1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CTSFQ9UBX1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CTSFQ9UBX1 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.87■□□□□ 0.61
CTSFQ9UBX1 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTSFQ9UBX1 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
CTSFQ9UBX1 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTSFQ9UBX1 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTSFQ9UBX1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTSFQ9UBX1 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CTSFQ9UBX1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTSFQ9UBX1 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTSFQ9UBX1 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CTSFQ9UBX1 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.87■□□□□ 0.61
CTSFQ9UBX1 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.87■□□□□ 0.61
CTSFQ9UBX1 AC239809.2-201ENST00000415381 517 ntBASIC18.87■□□□□ 0.61
CTSFQ9UBX1 DPP3P2-201ENST00000416030 1696 ntBASIC18.87■□□□□ 0.61
CTSFQ9UBX1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CTSFQ9UBX1 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CTSFQ9UBX1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CTSFQ9UBX1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.87■□□□□ 0.61
CTSFQ9UBX1 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.87■□□□□ 0.61
CTSFQ9UBX1 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CTSFQ9UBX1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.87■□□□□ 0.61
CTSFQ9UBX1 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.87■□□□□ 0.61
CTSFQ9UBX1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.87■□□□□ 0.61
CTSFQ9UBX1 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.87■□□□□ 0.61
CTSFQ9UBX1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms