Protein–RNA interactions for Protein: Q9NXX6

NSMCE4A, Non-structural maintenance of chromosomes element 4 homolog A, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4AQ9NXX6 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
NSMCE4AQ9NXX6 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NSMCE4AQ9NXX6 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NSMCE4AQ9NXX6 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NSMCE4AQ9NXX6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NSMCE4AQ9NXX6 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.07■□□□□ 0.8
NSMCE4AQ9NXX6 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.07■□□□□ 0.8
NSMCE4AQ9NXX6 AC137761.2-201ENST00000561729 223 ntBASIC20.07■□□□□ 0.8
NSMCE4AQ9NXX6 AC145350.3-201ENST00000569033 163 ntBASIC20.07■□□□□ 0.8
NSMCE4AQ9NXX6 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NSMCE4AQ9NXX6 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
NSMCE4AQ9NXX6 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NSMCE4AQ9NXX6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
NSMCE4AQ9NXX6 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NSMCE4AQ9NXX6 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.07■□□□□ 0.8
NSMCE4AQ9NXX6 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
NSMCE4AQ9NXX6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NSMCE4AQ9NXX6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NSMCE4AQ9NXX6 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NSMCE4AQ9NXX6 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.07■□□□□ 0.8
NSMCE4AQ9NXX6 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NSMCE4AQ9NXX6 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NSMCE4AQ9NXX6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.06■□□□□ 0.8
NSMCE4AQ9NXX6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
NSMCE4AQ9NXX6 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NSMCE4AQ9NXX6 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NSMCE4AQ9NXX6 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NSMCE4AQ9NXX6 MCRIP2P1-201ENST00000394346 511 ntBASIC20.06■□□□□ 0.8
NSMCE4AQ9NXX6 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.06■□□□□ 0.8
NSMCE4AQ9NXX6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.06■□□□□ 0.8
NSMCE4AQ9NXX6 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NSMCE4AQ9NXX6 AC016405.3-201ENST00000607710 860 ntBASIC20.06■□□□□ 0.8
NSMCE4AQ9NXX6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
NSMCE4AQ9NXX6 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
NSMCE4AQ9NXX6 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
NSMCE4AQ9NXX6 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NSMCE4AQ9NXX6 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
NSMCE4AQ9NXX6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NSMCE4AQ9NXX6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
NSMCE4AQ9NXX6 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.06■□□□□ 0.8
NSMCE4AQ9NXX6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
NSMCE4AQ9NXX6 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.06■□□□□ 0.8
NSMCE4AQ9NXX6 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.05■□□□□ 0.8
NSMCE4AQ9NXX6 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NSMCE4AQ9NXX6 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NSMCE4AQ9NXX6 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NSMCE4AQ9NXX6 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.05■□□□□ 0.8
NSMCE4AQ9NXX6 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.05■□□□□ 0.8
NSMCE4AQ9NXX6 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
NSMCE4AQ9NXX6 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
NSMCE4AQ9NXX6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
NSMCE4AQ9NXX6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.05■□□□□ 0.8
NSMCE4AQ9NXX6 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.05■□□□□ 0.8
NSMCE4AQ9NXX6 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
NSMCE4AQ9NXX6 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NSMCE4AQ9NXX6 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.05■□□□□ 0.8
NSMCE4AQ9NXX6 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.05■□□□□ 0.8
NSMCE4AQ9NXX6 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
NSMCE4AQ9NXX6 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
NSMCE4AQ9NXX6 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NSMCE4AQ9NXX6 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NSMCE4AQ9NXX6 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NSMCE4AQ9NXX6 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.05■□□□□ 0.8
NSMCE4AQ9NXX6 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NSMCE4AQ9NXX6 AC007952.6-201ENST00000573168 2673 ntBASIC20.05■□□□□ 0.8
NSMCE4AQ9NXX6 AC003957.1-201ENST00000625108 2673 ntBASIC20.05■□□□□ 0.8
NSMCE4AQ9NXX6 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NSMCE4AQ9NXX6 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.05■□□□□ 0.8
NSMCE4AQ9NXX6 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NSMCE4AQ9NXX6 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.04■□□□□ 0.8
NSMCE4AQ9NXX6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
NSMCE4AQ9NXX6 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NSMCE4AQ9NXX6 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NSMCE4AQ9NXX6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.04■□□□□ 0.8
NSMCE4AQ9NXX6 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.04■□□□□ 0.8
NSMCE4AQ9NXX6 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.04■□□□□ 0.8
NSMCE4AQ9NXX6 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NSMCE4AQ9NXX6 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NSMCE4AQ9NXX6 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NSMCE4AQ9NXX6 RARRES2P4-201ENST00000514074 484 ntBASIC20.04■□□□□ 0.8
NSMCE4AQ9NXX6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NSMCE4AQ9NXX6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NSMCE4AQ9NXX6 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.04■□□□□ 0.8
NSMCE4AQ9NXX6 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
NSMCE4AQ9NXX6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NSMCE4AQ9NXX6 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
NSMCE4AQ9NXX6 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.04■□□□□ 0.8
NSMCE4AQ9NXX6 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.04■□□□□ 0.8
NSMCE4AQ9NXX6 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NSMCE4AQ9NXX6 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NSMCE4AQ9NXX6 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.04■□□□□ 0.8
NSMCE4AQ9NXX6 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NSMCE4AQ9NXX6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NSMCE4AQ9NXX6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NSMCE4AQ9NXX6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.03■□□□□ 0.8
NSMCE4AQ9NXX6 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NSMCE4AQ9NXX6 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.03■□□□□ 0.8
NSMCE4AQ9NXX6 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NSMCE4AQ9NXX6 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.03■□□□□ 0.8
NSMCE4AQ9NXX6 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms