Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.323e-12■■■□□ 18.5
DROSHAQ9NRR4 BSG-212ENST00000590218 545 ntTSL 229.52■■■□□ 2.324e-7■■■□□ 18.5
DROSHAQ9NRR4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC29.7■■■□□ 2.344e-7■■■□□ 18.5
DROSHAQ9NRR4 RBM14-RBM4-202ENST00000421355 2034 ntTSL 227.9■■■□□ 2.064e-7■■■□□ 18.5
DROSHAQ9NRR4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC27.65■■■□□ 2.024e-7■■■□□ 18.5
DROSHAQ9NRR4 BRD2-216ENST00000581002 550 ntTSL 431.17■■■□□ 2.583e-7■■■□□ 18.5
DROSHAQ9NRR4 MIR365A-201ENST00000362260 87 ntBASIC-0.65□□□□□ -2.513e-7■■■□□ 18.5
DROSHAQ9NRR4 PPDPF-203ENST00000464438 373 ntTSL 228.67■■■□□ 2.182e-70■■■□□ 18.5
DROSHAQ9NRR4 DAZAP1-210ENST00000592453 1021 ntTSL 522.65■■□□□ 1.223e-7■■■□□ 18.5
DROSHAQ9NRR4 NOP58-208ENST00000488403 871 ntTSL 222.57■■□□□ 1.22e-13■■■□□ 18.5
DROSHAQ9NRR4 NOP58-202ENST00000426814 655 ntTSL 222.57■■□□□ 1.22e-13■■■□□ 18.5
DROSHAQ9NRR4 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.972e-13■■■□□ 18.5
DROSHAQ9NRR4 NOP58-205ENST00000472050 582 ntTSL 318.28■□□□□ 0.522e-13■■■□□ 18.5
DROSHAQ9NRR4 NOP58-204ENST00000467734 638 ntTSL 517.19■□□□□ 0.342e-13■■■□□ 18.5
DROSHAQ9NRR4 NOP58-209ENST00000492688 571 ntTSL 45.54□□□□□ -1.522e-13■■■□□ 18.5
DROSHAQ9NRR4 LARP1-201ENST00000336314 6595 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.153e-8■■■□□ 18.5
DROSHAQ9NRR4 EIF1-204ENST00000469308 815 ntTSL 234.64■■■■□ 3.143e-9■■■□□ 18.5
DROSHAQ9NRR4 EIF1-202ENST00000462917 2170 ntTSL 1 (best)27.39■■□□□ 1.973e-9■■■□□ 18.5
DROSHAQ9NRR4 LEPR-206ENST00000462765 2117 ntTSL 1 (best)24.87■■□□□ 1.573e-9■■■□□ 18.5
DROSHAQ9NRR4 LEPR-201ENST00000344610 2935 ntTSL 1 (best) BASIC17.74■□□□□ 0.433e-9■■■□□ 18.5
DROSHAQ9NRR4 ESCO1-203ENST00000580101 575 ntTSL 417.37■□□□□ 0.373e-9■■■□□ 18.5
DROSHAQ9NRR4 LEPR-204ENST00000371059 3079 ntTSL 1 (best) BASIC17.16■□□□□ 0.343e-9■■■□□ 18.5
DROSHAQ9NRR4 ESCO1-202ENST00000383276 4773 ntTSL 214.01□□□□□ -0.173e-9■■■□□ 18.5
DROSHAQ9NRR4 EIF1-201ENST00000310837 1120 ntTSL 1 (best)13.98□□□□□ -0.173e-9■■■□□ 18.5
DROSHAQ9NRR4 EIF1-207ENST00000591776 797 ntTSL 4 BASIC11.28□□□□□ -0.63e-9■■■□□ 18.5
DROSHAQ9NRR4 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.843e-9■■■□□ 18.5
DROSHAQ9NRR4 EIF1-205ENST00000482111 1428 ntTSL 29.78□□□□□ -0.843e-9■■■□□ 18.5
DROSHAQ9NRR4 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC9.74□□□□□ -0.853e-9■■■□□ 18.5
DROSHAQ9NRR4 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC8.19□□□□□ -1.13e-9■■■□□ 18.5
DROSHAQ9NRR4 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.23e-9■■■□□ 18.5
DROSHAQ9NRR4 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.523e-9■■■□□ 18.5
DROSHAQ9NRR4 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.994e-8■■■□□ 18.5
DROSHAQ9NRR4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.696e-7■■■□□ 18.5
DROSHAQ9NRR4 GRINA-205ENST00000529301 1075 ntTSL 331.65■■■□□ 2.666e-7■■■□□ 18.5
DROSHAQ9NRR4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.336e-7■■■□□ 18.5
DROSHAQ9NRR4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC31.23■■■□□ 2.598e-9■■■□□ 18.5
DROSHAQ9NRR4 SQLE-205ENST00000521232 711 ntTSL 326.19■■□□□ 1.788e-9■■■□□ 18.5
DROSHAQ9NRR4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.38e-9■■■□□ 18.5
DROSHAQ9NRR4 TRAF2-202ENST00000414589 680 ntTSL 319.95■□□□□ 0.792e-8■■■□□ 18.5
DROSHAQ9NRR4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC22.19■■□□□ 1.142e-8■■■□□ 18.4
DROSHAQ9NRR4 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC19.95■□□□□ 0.782e-8■■■□□ 18.4
DROSHAQ9NRR4 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.262e-8■■■□□ 18.4
DROSHAQ9NRR4 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC9.76□□□□□ -0.852e-8■■■□□ 18.4
DROSHAQ9NRR4 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.842e-8■■■□□ 18.4
DROSHAQ9NRR4 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.42e-8■■■□□ 18.4
DROSHAQ9NRR4 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.352e-8■■■□□ 18.4
DROSHAQ9NRR4 FAM122B-208ENST00000611027 1059 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.112e-8■■■□□ 18.4
DROSHAQ9NRR4 FAM122B-207ENST00000493333 1078 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.072e-8■■■□□ 18.4
DROSHAQ9NRR4 RBM14-206ENST00000460762 459 ntTSL 231.23■■■□□ 2.596e-9■■■□□ 18.4
DROSHAQ9NRR4 MYH10-204ENST00000411957 732 ntTSL 327.48■■□□□ 1.992e-6■■■□□ 18.4
DROSHAQ9NRR4 MYH10-202ENST00000360416 7762 ntTSL 1 (best) BASIC14.04□□□□□ -0.162e-6■■■□□ 18.4
DROSHAQ9NRR4 MYH10-201ENST00000269243 7662 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.312e-6■■■□□ 18.4
DROSHAQ9NRR4 MYH10-203ENST00000379980 7694 ntTSL 1 (best) BASIC13.14□□□□□ -0.312e-6■■■□□ 18.4
DROSHAQ9NRR4 CATSPER2-204ENST00000409481 568 ntTSL 511.75□□□□□ -0.532e-6■■■□□ 18.4
DROSHAQ9NRR4 CATSPER2-210ENST00000464721 290 ntTSL 1 (best)2.02□□□□□ -2.092e-6■■■□□ 18.4
DROSHAQ9NRR4 MBOAT2-207ENST00000477073 754 ntTSL 333.29■■■□□ 2.923e-6■■■□□ 18.4
DROSHAQ9NRR4 MBOAT2-203ENST00000462696 580 ntTSL 425.22■■□□□ 1.633e-6■■■□□ 18.4
DROSHAQ9NRR4 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.473e-6■■■□□ 18.4
DROSHAQ9NRR4 FAM78A-201ENST00000247295 4560 ntTSL 213.73□□□□□ -0.213e-6■■■□□ 18.4
DROSHAQ9NRR4 MBOAT2-209ENST00000486484 1351 ntTSL 26.23□□□□□ -1.413e-6■■■□□ 18.4
DROSHAQ9NRR4 PKNOX1-202ENST00000418336 459 ntTSL 231.87■■■□□ 2.691e-6■■■□□ 18.4
DROSHAQ9NRR4 PKNOX1-206ENST00000480179 1725 ntTSL 221.67■■□□□ 1.061e-6■■■□□ 18.4
DROSHAQ9NRR4 PKNOX1-201ENST00000291547 5003 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.291e-6■■■□□ 18.4
DROSHAQ9NRR4 PKNOX1-203ENST00000432907 5180 ntTSL 2 BASIC12.22□□□□□ -0.451e-6■■■□□ 18.4
DROSHAQ9NRR4 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC39.72■■■■□ 3.954e-8■■■□□ 18.4
DROSHAQ9NRR4 MKNK2-205ENST00000586828 1503 ntTSL 230.27■■■□□ 2.444e-8■■■□□ 18.4
DROSHAQ9NRR4 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC20.46■□□□□ 0.874e-8■■■□□ 18.4
DROSHAQ9NRR4 MKNK2-213ENST00000591601 3582 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.124e-8■■■□□ 18.4
DROSHAQ9NRR4 DAZAP1-204ENST00000586579 619 ntTSL 334.63■■■■□ 3.133e-7■■■□□ 18.3
DROSHAQ9NRR4 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC22.86■■□□□ 1.253e-6■■■□□ 18.3
DROSHAQ9NRR4 AC011450.1-201ENST00000602554 511 ntTSL 213.04□□□□□ -0.323e-6■■■□□ 18.3
DROSHAQ9NRR4 KLC4-206ENST00000460283 550 ntTSL 430.79■■■□□ 2.521e-10■■■□□ 18.3
DROSHAQ9NRR4 KLC4-217ENST00000481499 1465 ntTSL 428.28■■■□□ 2.121e-10■■■□□ 18.3
DROSHAQ9NRR4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC27.88■■■□□ 2.051e-5■■■□□ 18.3
DROSHAQ9NRR4 GRB7-208ENST00000485182 879 ntTSL 225.89■■□□□ 1.741e-5■■■□□ 18.3
DROSHAQ9NRR4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.561e-5■■■□□ 18.3
DROSHAQ9NRR4 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC24.13■■□□□ 1.451e-5■■■□□ 18.3
DROSHAQ9NRR4 KLC4-212ENST00000470728 872 ntTSL 523.98■■□□□ 1.431e-10■■■□□ 18.3
DROSHAQ9NRR4 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC23.78■■□□□ 1.41e-10■■■□□ 18.3
DROSHAQ9NRR4 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.351e-10■■■□□ 18.3
DROSHAQ9NRR4 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC22.68■■□□□ 1.221e-10■■■□□ 18.3
DROSHAQ9NRR4 GRB7-209ENST00000577695 612 ntTSL 522.67■■□□□ 1.221e-5■■■□□ 18.3
DROSHAQ9NRR4 GRB7-211ENST00000583813 560 ntTSL 422.61■■□□□ 1.211e-5■■■□□ 18.3
DROSHAQ9NRR4 GRB7-213ENST00000584819 1146 ntTSL 222.45■■□□□ 1.181e-5■■■□□ 18.3
DROSHAQ9NRR4 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.181e-5■■■□□ 18.3
DROSHAQ9NRR4 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.161e-5■■■□□ 18.3
DROSHAQ9NRR4 GRB7-210ENST00000578702 630 ntTSL 320.77■□□□□ 0.921e-5■■■□□ 18.3
DROSHAQ9NRR4 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.731e-10■■■□□ 18.3
DROSHAQ9NRR4 KLC4-201ENST00000259708 2688 ntAPPRIS P4 TSL 2 BASIC17.88■□□□□ 0.451e-10■■■□□ 18.3
DROSHAQ9NRR4 KLC4-216ENST00000479632 528 ntTSL 417.13■□□□□ 0.331e-10■■■□□ 18.3
DROSHAQ9NRR4 KLC4-215ENST00000479388 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.311e-10■■■□□ 18.3
DROSHAQ9NRR4 KLC4-214ENST00000472792 577 ntTSL 314.5□□□□□ -0.091e-10■■■□□ 18.3
DROSHAQ9NRR4 KLC4-209ENST00000467906 3604 ntTSL 212.67□□□□□ -0.381e-10■■■□□ 18.3
DROSHAQ9NRR4 AC005726.2-201ENST00000481916 2091 ntTSL 1 (best)31.41■■■□□ 2.622e-7■■■□□ 18.3
DROSHAQ9NRR4 PHF1-208ENST00000486845 1099 ntTSL 531.89■■■□□ 2.72e-15■■■□□ 18.3
DROSHAQ9NRR4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC25.87■■□□□ 1.732e-15■■■□□ 18.3
DROSHAQ9NRR4 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.522e-15■■■□□ 18.3
DROSHAQ9NRR4 PHF1-211ENST00000495509 1752 ntTSL 223.79■■□□□ 1.42e-15■■■□□ 18.3
DROSHAQ9NRR4 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC39.77■■■■□ 3.961e-6■■■□□ 18.3
DROSHAQ9NRR4 GRK6-204ENST00000502598 557 ntTSL 430.32■■■□□ 2.441e-6■■■□□ 18.3
Retrieved 100 of 16,331 protein–RNA pairs in 87.5 ms