RNA–Protein interactions for RNA: ENST00000247295.4

FAM78A-201, Transcript of family with sequence similarity 78 member A, humanhuman

TSL 2

Gene FAM78A, Length 4,560 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78A-201ENST00000247295 DCAF8L2P0C7V8 631 aa20.03■□□□□ 0.8
FAM78A-201ENST00000247295 NISCHQ9Y2I1 1504 aa19.36■□□□□ 0.69
FAM78A-201ENST00000247295 SUPT5HO00267 1087 aaKnown RBP19.16■□□□□ 0.66
FAM78A-201ENST00000247295 SHROOM4Q9ULL8 1493 aa18.93■□□□□ 0.62
FAM78A-201ENST00000247295 EHMT2Q96KQ7 1210 aa18.57■□□□□ 0.56
FAM78A-201ENST00000247295 FAM9AQ8IZU1 332 aaPredicted RBP18.08■□□□□ 0.49
FAM78A-201ENST00000247295 PELP1Q8IZL8 1130 aaKnown RBP17.99■□□□□ 0.47
FAM78A-201ENST00000247295 PCGF6Q9BYE7 350 aa17.96■□□□□ 0.47
FAM78A-201ENST00000247295 TTBK1Q5TCY1 1321 aaPredicted RBP17.9■□□□□ 0.46
FAM78A-201ENST00000247295 APLP2Q06481 763 aa17.71■□□□□ 0.42
FAM78A-201ENST00000247295 RANGAP1P46060 587 aaPredicted RBP17.66■□□□□ 0.42
FAM78A-201ENST00000247295 MYT1Q01538 1121 aa17.64■□□□□ 0.41
FAM78A-201ENST00000247295 TRIM41Q8WV44 630 aa17.6■□□□□ 0.41
FAM78A-201ENST00000247295 CENPBP07199 599 aaPredicted RBP17.47■□□□□ 0.39
FAM78A-201ENST00000247295 HRCP23327 699 aa17.4■□□□□ 0.38
FAM78A-201ENST00000247295 PPARGC1BQ86YN6 1023 aaKnown RBP17.38■□□□□ 0.37
FAM78A-201ENST00000247295 UBTFP17480 764 aaKnown RBP17.35■□□□□ 0.37
FAM78A-201ENST00000247295 CCER1Q8TC90 406 aaPredicted RBP17.34■□□□□ 0.37
FAM78A-201ENST00000247295 ATP1B4Q9UN42 357 aaPredicted RBP17.31■□□□□ 0.36
FAM78A-201ENST00000247295 YTHDC1Q96MU7 727 aaKnown RBP17.26■□□□□ 0.35
FAM78A-201ENST00000247295 ZEB1P37275 1124 aaPredicted RBP17.22■□□□□ 0.35
FAM78A-201ENST00000247295 LOC105371045A0A1W2PR82 267 aa17.19■□□□□ 0.34
FAM78A-201ENST00000247295 ERICH6Q7L0X2 663 aa17.18■□□□□ 0.34
FAM78A-201ENST00000247295 CHIC1Q5VXU3 224 aa17.11■□□□□ 0.33
FAM78A-201ENST00000247295 TRIM26Q12899 539 aaPredicted RBP16.97■□□□□ 0.31
FAM78A-201ENST00000247295 ITGAEP38570 1179 aa16.89■□□□□ 0.29
FAM78A-201ENST00000247295 HNRNPUL2Q1KMD3 747 aaKnown RBP16.8■□□□□ 0.28
FAM78A-201ENST00000247295 NEFLP07196 543 aa16.73■□□□□ 0.27
FAM78A-201ENST00000247295 GTF3C3Q9Y5Q9 886 aa16.73■□□□□ 0.27
FAM78A-201ENST00000247295 PABPN1Q86U42 306 aaKnown RBP eCLIP16.71■□□□□ 0.27
FAM78A-201ENST00000247295 ABCC9O60706 1549 aa16.7■□□□□ 0.26
FAM78A-201ENST00000247295 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.68■□□□□ 0.26
FAM78A-201ENST00000247295 CNGB1Q14028 1251 aaPredicted RBP16.57■□□□□ 0.24
FAM78A-201ENST00000247295 DIEXFQ68CQ4 756 aaKnown RBP16.56■□□□□ 0.24
FAM78A-201ENST00000247295 POLR3GLQ9BT43 218 aa16.56■□□□□ 0.24
FAM78A-201ENST00000247295 MYT1LQ9UL68 1186 aa16.46■□□□□ 0.22
FAM78A-201ENST00000247295 ACIN1Q9UKV3 1341 aaKnown RBP16.44■□□□□ 0.22
FAM78A-201ENST00000247295 SCAF1Q9H7N4 1312 aaKnown RBP16.39■□□□□ 0.21
FAM78A-201ENST00000247295 FAM50AQ14320 339 aaKnown RBP16.36■□□□□ 0.21
FAM78A-201ENST00000247295 BCANQ96GW7 911 aa16.36■□□□□ 0.21
FAM78A-201ENST00000247295 NEUROD1Q13562 356 aa16.26■□□□□ 0.19
FAM78A-201ENST00000247295 RTL5Q5HYW3 569 aaPredicted RBP16.2■□□□□ 0.18
FAM78A-201ENST00000247295 TRIM52Q96A61 297 aa16.19■□□□□ 0.18
FAM78A-201ENST00000247295 P3H3Q8IVL6 736 aa16.18■□□□□ 0.18
FAM78A-201ENST00000247295 CSRNP3Q8WYN3 585 aa16.16■□□□□ 0.18
FAM78A-201ENST00000247295 ARID3CA6NKF2 412 aa16.14■□□□□ 0.17
FAM78A-201ENST00000247295 FBLN2P98095 1184 aa16.12■□□□□ 0.17
FAM78A-201ENST00000247295 DAXXQ9UER7 740 aaPredicted RBP16.11■□□□□ 0.17
FAM78A-201ENST00000247295 SLC4A1APQ9BWU0 796 aaKnown RBP16.11■□□□□ 0.17
FAM78A-201ENST00000247295 ZNF326Q5BKZ1 582 aaKnown RBP16.08■□□□□ 0.16
FAM78A-201ENST00000247295 SCRIBQ14160 1630 aa16.03■□□□□ 0.16
FAM78A-201ENST00000247295 ZCCHC6Q5VYS8 1495 aaKnown RBP16.02■□□□□ 0.15
FAM78A-201ENST00000247295 ZNF316A6NFI3 1004 aaPredicted RBP15.99■□□□□ 0.15
FAM78A-201ENST00000247295 EIF5BO60841 1220 aaKnown RBP15.96■□□□□ 0.15
FAM78A-201ENST00000247295 CDK11AQ9UQ88 783 aaPredicted RBP15.91■□□□□ 0.14
FAM78A-201ENST00000247295 ANP32CO43423 234 aa15.89■□□□□ 0.13
FAM78A-201ENST00000247295 ZNF777Q9ULD5 760 aaPredicted RBP15.86■□□□□ 0.13
FAM78A-201ENST00000247295 CLSPNQ9HAW4 1339 aa15.84■□□□□ 0.13
FAM78A-201ENST00000247295 FKBP8Q14318 412 aa15.81■□□□□ 0.12
FAM78A-201ENST00000247295 BCL11AQ9H165 835 aa15.78■□□□□ 0.12
FAM78A-201ENST00000247295 MYO15BQ96JP2 1530 aa15.77■□□□□ 0.12
FAM78A-201ENST00000247295 ANP32EQ9BTT0 268 aa15.75■□□□□ 0.11
FAM78A-201ENST00000247295 DCAF1Q9Y4B6 1507 aa15.73■□□□□ 0.11
FAM78A-201ENST00000247295 NBR1Q14596 966 aa15.72■□□□□ 0.11
FAM78A-201ENST00000247295 CHIC2Q9UKJ5 165 aa15.7■□□□□ 0.1
FAM78A-201ENST00000247295 DDX10Q13206 875 aaKnown RBP15.69■□□□□ 0.1
FAM78A-201ENST00000247295 MIER1Q8N108 512 aa15.67■□□□□ 0.1
FAM78A-201ENST00000247295 RSF1Q96T23 1441 aaPredicted RBP15.65■□□□□ 0.1
FAM78A-201ENST00000247295 NPM2Q86SE8 214 aaKnown RBP15.65■□□□□ 0.1
FAM78A-201ENST00000247295 HIRIP3Q9BW71 556 aaPredicted RBP15.63■□□□□ 0.09
FAM78A-201ENST00000247295 TONSLQ96HA7 1378 aa15.62■□□□□ 0.09
FAM78A-201ENST00000247295 ANP32AP39687 249 aaKnown RBP15.61■□□□□ 0.09
FAM78A-201ENST00000247295 CCDC180Q9P1Z9 1646 aa15.58■□□□□ 0.08
FAM78A-201ENST00000247295 HNRNPUQ00839 825 aaKnown RBP eCLIP15.56■□□□□ 0.08
FAM78A-201ENST00000247295 CLIP1P30622 1438 aa15.55■□□□□ 0.08
FAM78A-201ENST00000247295 SALL2Q9Y467 1007 aaPredicted RBP15.55■□□□□ 0.08
FAM78A-201ENST00000247295 FAM9BQ8IZU0 186 aa15.55■□□□□ 0.08
FAM78A-201ENST00000247295 CHGAP10645 457 aaKnown RBP15.53■□□□□ 0.08
FAM78A-201ENST00000247295 SLC24A1O60721 1099 aa15.51■□□□□ 0.07
FAM78A-201ENST00000247295 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.51■□□□□ 0.07
FAM78A-201ENST00000247295 CANXP27824 592 aaKnown RBP15.51■□□□□ 0.07
FAM78A-201ENST00000247295 RTN4Q9NQC3 1192 aaKnown RBP15.49■□□□□ 0.07
FAM78A-201ENST00000247295 MTUS2Q5JR59 1369 aa15.48■□□□□ 0.07
FAM78A-201ENST00000247295 IRX6P78412 446 aaPredicted RBP15.48■□□□□ 0.07
FAM78A-201ENST00000247295 CEP162Q5TB80 1403 aa15.47■□□□□ 0.07
FAM78A-201ENST00000247295 KDM2AQ9Y2K7 1162 aa15.47■□□□□ 0.07
FAM78A-201ENST00000247295 RRP7BPQ9NSQ0 103 aa15.46■□□□□ 0.07
FAM78A-201ENST00000247295 GLIPR1L2Q4G1C9 344 aa15.44■□□□□ 0.06
FAM78A-201ENST00000247295 PLPPR3Q6T4P5 718 aa15.43■□□□□ 0.06
FAM78A-201ENST00000247295 ZBTB47Q9UFB7 747 aaPredicted RBP15.41■□□□□ 0.06
FAM78A-201ENST00000247295 WRNQ14191 1432 aaPredicted RBP eCLIP15.41■□□□□ 0.06
FAM78A-201ENST00000247295 CHMP7Q8WUX9 453 aaPredicted RBP15.41■□□□□ 0.06
FAM78A-201ENST00000247295 CECR2Q9BXF3 1484 aa15.41■□□□□ 0.06
FAM78A-201ENST00000247295 SENP3-EIF4A1A0A087X0R7 540 aa15.4■□□□□ 0.06
FAM78A-201ENST00000247295 TSPY4P0CV99 314 aa15.39■□□□□ 0.05
FAM78A-201ENST00000247295 TSPY10P0CW01 314 aa15.39■□□□□ 0.05
FAM78A-201ENST00000247295 SENP3Q9H4L4 574 aaPredicted RBP15.39■□□□□ 0.05
FAM78A-201ENST00000247295 ARXQ96QS3 562 aa15.37■□□□□ 0.05
FAM78A-201ENST00000247295 NEFMP07197 916 aa15.37■□□□□ 0.05
FAM78A-201ENST00000247295 RB1CC1Q8TDY2 1594 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms