Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NLRC4Q9NPP4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
NLRC4Q9NPP4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.75■■□□□ 1.07
NLRC4Q9NPP4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.75■■□□□ 1.07
NLRC4Q9NPP4 AC007322.4-201ENST00000509611 723 ntBASIC21.75■■□□□ 1.07
NLRC4Q9NPP4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.75■■□□□ 1.07
NLRC4Q9NPP4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.75■■□□□ 1.07
NLRC4Q9NPP4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NLRC4Q9NPP4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
NLRC4Q9NPP4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NLRC4Q9NPP4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.75■■□□□ 1.07
NLRC4Q9NPP4 AL158211.5-201ENST00000623583 2518 ntBASIC21.75■■□□□ 1.07
NLRC4Q9NPP4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NLRC4Q9NPP4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NLRC4Q9NPP4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NLRC4Q9NPP4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NLRC4Q9NPP4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NLRC4Q9NPP4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
NLRC4Q9NPP4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NLRC4Q9NPP4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
NLRC4Q9NPP4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NLRC4Q9NPP4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NLRC4Q9NPP4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
NLRC4Q9NPP4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NLRC4Q9NPP4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.74■■□□□ 1.07
NLRC4Q9NPP4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NLRC4Q9NPP4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.74■■□□□ 1.07
NLRC4Q9NPP4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.74■■□□□ 1.07
NLRC4Q9NPP4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.74■■□□□ 1.07
NLRC4Q9NPP4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.74■■□□□ 1.07
NLRC4Q9NPP4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NLRC4Q9NPP4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
NLRC4Q9NPP4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
NLRC4Q9NPP4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.73■■□□□ 1.07
NLRC4Q9NPP4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NLRC4Q9NPP4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NLRC4Q9NPP4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NLRC4Q9NPP4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NLRC4Q9NPP4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.73■■□□□ 1.07
NLRC4Q9NPP4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
NLRC4Q9NPP4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.73■■□□□ 1.07
NLRC4Q9NPP4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.73■■□□□ 1.07
NLRC4Q9NPP4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
NLRC4Q9NPP4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.73■■□□□ 1.07
NLRC4Q9NPP4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
NLRC4Q9NPP4 CNN2P6-201ENST00000439038 900 ntBASIC21.73■■□□□ 1.07
NLRC4Q9NPP4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.73■■□□□ 1.07
NLRC4Q9NPP4 DUX4L16-201ENST00000555130 1264 ntBASIC21.73■■□□□ 1.07
NLRC4Q9NPP4 AL162412.1-201ENST00000567129 965 ntBASIC21.73■■□□□ 1.07
NLRC4Q9NPP4 RARRES2P6-201ENST00000567333 442 ntBASIC21.73■■□□□ 1.07
NLRC4Q9NPP4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.73■■□□□ 1.07
NLRC4Q9NPP4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.73■■□□□ 1.07
NLRC4Q9NPP4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NLRC4Q9NPP4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
NLRC4Q9NPP4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
NLRC4Q9NPP4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
NLRC4Q9NPP4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NLRC4Q9NPP4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.73■■□□□ 1.07
NLRC4Q9NPP4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NLRC4Q9NPP4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NLRC4Q9NPP4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
NLRC4Q9NPP4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NLRC4Q9NPP4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
NLRC4Q9NPP4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NLRC4Q9NPP4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NLRC4Q9NPP4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NLRC4Q9NPP4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NLRC4Q9NPP4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.72■■□□□ 1.07
NLRC4Q9NPP4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.72■■□□□ 1.07
NLRC4Q9NPP4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NLRC4Q9NPP4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NLRC4Q9NPP4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.72■■□□□ 1.07
NLRC4Q9NPP4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NLRC4Q9NPP4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.72■■□□□ 1.07
NLRC4Q9NPP4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
NLRC4Q9NPP4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NLRC4Q9NPP4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NLRC4Q9NPP4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NLRC4Q9NPP4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
NLRC4Q9NPP4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NLRC4Q9NPP4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.71■■□□□ 1.07
NLRC4Q9NPP4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
NLRC4Q9NPP4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NLRC4Q9NPP4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.71■■□□□ 1.07
NLRC4Q9NPP4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.71■■□□□ 1.07
NLRC4Q9NPP4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
NLRC4Q9NPP4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
NLRC4Q9NPP4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NLRC4Q9NPP4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.71■■□□□ 1.07
NLRC4Q9NPP4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NLRC4Q9NPP4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NLRC4Q9NPP4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NLRC4Q9NPP4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
NLRC4Q9NPP4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
NLRC4Q9NPP4 AC068338.2-201ENST00000563278 1430 ntBASIC21.71■■□□□ 1.07
NLRC4Q9NPP4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NLRC4Q9NPP4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.71■■□□□ 1.07
NLRC4Q9NPP4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
NLRC4Q9NPP4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
NLRC4Q9NPP4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms