Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GCM1Q9NP62 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GCM1Q9NP62 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GCM1Q9NP62 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
GCM1Q9NP62 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.12■□□□□ 0.33
GCM1Q9NP62 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.12■□□□□ 0.33
GCM1Q9NP62 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GCM1Q9NP62 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.12■□□□□ 0.33
GCM1Q9NP62 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GCM1Q9NP62 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GCM1Q9NP62 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GCM1Q9NP62 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GCM1Q9NP62 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.12■□□□□ 0.33
GCM1Q9NP62 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GCM1Q9NP62 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GCM1Q9NP62 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GCM1Q9NP62 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GCM1Q9NP62 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GCM1Q9NP62 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
GCM1Q9NP62 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.12■□□□□ 0.33
GCM1Q9NP62 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GCM1Q9NP62 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
GCM1Q9NP62 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
GCM1Q9NP62 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
GCM1Q9NP62 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GCM1Q9NP62 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GCM1Q9NP62 KRT18P6-201ENST00000555540 1265 ntBASIC17.11■□□□□ 0.33
GCM1Q9NP62 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.11■□□□□ 0.33
GCM1Q9NP62 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.11■□□□□ 0.33
GCM1Q9NP62 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
GCM1Q9NP62 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
GCM1Q9NP62 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.11■□□□□ 0.33
GCM1Q9NP62 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
GCM1Q9NP62 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
GCM1Q9NP62 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GCM1Q9NP62 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.1■□□□□ 0.33
GCM1Q9NP62 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
GCM1Q9NP62 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GCM1Q9NP62 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GCM1Q9NP62 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GCM1Q9NP62 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GCM1Q9NP62 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
GCM1Q9NP62 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GCM1Q9NP62 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GCM1Q9NP62 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
GCM1Q9NP62 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GCM1Q9NP62 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
GCM1Q9NP62 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.1■□□□□ 0.33
GCM1Q9NP62 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GCM1Q9NP62 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.1■□□□□ 0.33
GCM1Q9NP62 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.1■□□□□ 0.33
GCM1Q9NP62 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.1■□□□□ 0.33
GCM1Q9NP62 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.1■□□□□ 0.33
GCM1Q9NP62 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
GCM1Q9NP62 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GCM1Q9NP62 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GCM1Q9NP62 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GCM1Q9NP62 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GCM1Q9NP62 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.1■□□□□ 0.33
GCM1Q9NP62 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.1■□□□□ 0.33
GCM1Q9NP62 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.1■□□□□ 0.33
GCM1Q9NP62 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
GCM1Q9NP62 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GCM1Q9NP62 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
GCM1Q9NP62 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GCM1Q9NP62 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
GCM1Q9NP62 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.09■□□□□ 0.33
GCM1Q9NP62 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.09■□□□□ 0.33
GCM1Q9NP62 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
GCM1Q9NP62 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.09■□□□□ 0.33
GCM1Q9NP62 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.09■□□□□ 0.33
GCM1Q9NP62 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.09■□□□□ 0.33
GCM1Q9NP62 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.09■□□□□ 0.33
GCM1Q9NP62 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.09■□□□□ 0.33
GCM1Q9NP62 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.09■□□□□ 0.33
GCM1Q9NP62 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GCM1Q9NP62 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
GCM1Q9NP62 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GCM1Q9NP62 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GCM1Q9NP62 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GCM1Q9NP62 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.09■□□□□ 0.33
GCM1Q9NP62 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.09■□□□□ 0.33
GCM1Q9NP62 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GCM1Q9NP62 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
GCM1Q9NP62 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
GCM1Q9NP62 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.09■□□□□ 0.33
GCM1Q9NP62 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GCM1Q9NP62 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
GCM1Q9NP62 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GCM1Q9NP62 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
GCM1Q9NP62 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.09■□□□□ 0.33
GCM1Q9NP62 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
GCM1Q9NP62 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
GCM1Q9NP62 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GCM1Q9NP62 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.08■□□□□ 0.33
GCM1Q9NP62 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.08■□□□□ 0.33
GCM1Q9NP62 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.08■□□□□ 0.33
GCM1Q9NP62 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GCM1Q9NP62 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GCM1Q9NP62 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms