Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.55■□□□□ 0.88
SP110Q9HB58 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.55■□□□□ 0.88
SP110Q9HB58 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.55■□□□□ 0.88
SP110Q9HB58 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SP110Q9HB58 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SP110Q9HB58 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SP110Q9HB58 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SP110Q9HB58 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SP110Q9HB58 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.54■□□□□ 0.88
SP110Q9HB58 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SP110Q9HB58 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SP110Q9HB58 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SP110Q9HB58 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.54■□□□□ 0.88
SP110Q9HB58 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.54■□□□□ 0.88
SP110Q9HB58 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.54■□□□□ 0.88
SP110Q9HB58 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SP110Q9HB58 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SP110Q9HB58 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.54■□□□□ 0.88
SP110Q9HB58 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SP110Q9HB58 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SP110Q9HB58 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SP110Q9HB58 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SP110Q9HB58 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SP110Q9HB58 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SP110Q9HB58 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SP110Q9HB58 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SP110Q9HB58 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SP110Q9HB58 PTBP1P-201ENST00000554374 1601 ntBASIC20.53■□□□□ 0.88
SP110Q9HB58 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SP110Q9HB58 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SP110Q9HB58 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SP110Q9HB58 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.53■□□□□ 0.88
SP110Q9HB58 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SP110Q9HB58 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SP110Q9HB58 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.53■□□□□ 0.88
SP110Q9HB58 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SP110Q9HB58 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SP110Q9HB58 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SP110Q9HB58 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SP110Q9HB58 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SP110Q9HB58 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.53■□□□□ 0.88
SP110Q9HB58 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.53■□□□□ 0.88
SP110Q9HB58 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SP110Q9HB58 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SP110Q9HB58 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.53■□□□□ 0.88
SP110Q9HB58 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SP110Q9HB58 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
SP110Q9HB58 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SP110Q9HB58 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SP110Q9HB58 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SP110Q9HB58 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SP110Q9HB58 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.52■□□□□ 0.88
SP110Q9HB58 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.52■□□□□ 0.88
SP110Q9HB58 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SP110Q9HB58 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.52■□□□□ 0.88
SP110Q9HB58 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.52■□□□□ 0.88
SP110Q9HB58 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SP110Q9HB58 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.52■□□□□ 0.88
SP110Q9HB58 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SP110Q9HB58 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SP110Q9HB58 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.52■□□□□ 0.87
SP110Q9HB58 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
SP110Q9HB58 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.51■□□□□ 0.87
SP110Q9HB58 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SP110Q9HB58 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SP110Q9HB58 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.51■□□□□ 0.87
SP110Q9HB58 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SP110Q9HB58 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SP110Q9HB58 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SP110Q9HB58 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SP110Q9HB58 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SP110Q9HB58 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SP110Q9HB58 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SP110Q9HB58 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.51■□□□□ 0.87
SP110Q9HB58 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.51■□□□□ 0.87
SP110Q9HB58 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.51■□□□□ 0.87
SP110Q9HB58 AL031963.3-201ENST00000606441 850 ntBASIC20.51■□□□□ 0.87
SP110Q9HB58 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SP110Q9HB58 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SP110Q9HB58 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.51■□□□□ 0.87
SP110Q9HB58 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SP110Q9HB58 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.51■□□□□ 0.87
SP110Q9HB58 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SP110Q9HB58 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.5■□□□□ 0.87
SP110Q9HB58 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SP110Q9HB58 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SP110Q9HB58 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SP110Q9HB58 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SP110Q9HB58 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SP110Q9HB58 HLA-G-202ENST00000376815 851 ntBASIC20.5■□□□□ 0.87
SP110Q9HB58 HLA-G-203ENST00000376818 1127 ntBASIC20.5■□□□□ 0.87
SP110Q9HB58 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.5■□□□□ 0.87
SP110Q9HB58 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SP110Q9HB58 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.5■□□□□ 0.87
SP110Q9HB58 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
SP110Q9HB58 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SP110Q9HB58 AC023632.3-201ENST00000521633 145 ntBASIC20.5■□□□□ 0.87
SP110Q9HB58 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SP110Q9HB58 AC060766.5-201ENST00000590539 871 ntBASIC20.5■□□□□ 0.87
SP110Q9HB58 HLA-B-256ENST00000639848 1089 ntBASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms