Protein–RNA interactions for Protein: Q9H9D4

ZNF408, Zinc finger protein 408, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF408Q9H9D4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
ZNF408Q9H9D4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC23.7■■□□□ 1.38
ZNF408Q9H9D4 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC23.7■■□□□ 1.38
ZNF408Q9H9D4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
ZNF408Q9H9D4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
ZNF408Q9H9D4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
ZNF408Q9H9D4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
ZNF408Q9H9D4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
ZNF408Q9H9D4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
ZNF408Q9H9D4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
ZNF408Q9H9D4 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
ZNF408Q9H9D4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
ZNF408Q9H9D4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
ZNF408Q9H9D4 FSCN1P1-201ENST00000568912 1481 ntBASIC23.69■■□□□ 1.38
ZNF408Q9H9D4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.69■■□□□ 1.38
ZNF408Q9H9D4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
ZNF408Q9H9D4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
ZNF408Q9H9D4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC23.69■■□□□ 1.38
ZNF408Q9H9D4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
ZNF408Q9H9D4 TSPY14P-201ENST00000303979 915 ntBASIC23.69■■□□□ 1.38
ZNF408Q9H9D4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
ZNF408Q9H9D4 AL031133.1-201ENST00000406807 723 ntBASIC23.69■■□□□ 1.38
ZNF408Q9H9D4 AC026396.1-201ENST00000419388 421 ntBASIC23.69■■□□□ 1.38
ZNF408Q9H9D4 AC128688.1-201ENST00000487626 519 ntBASIC23.69■■□□□ 1.38
ZNF408Q9H9D4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
ZNF408Q9H9D4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
ZNF408Q9H9D4 CLN6-204ENST00000564752 900 ntTSL 3 BASIC23.69■■□□□ 1.38
ZNF408Q9H9D4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
ZNF408Q9H9D4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC23.69■■□□□ 1.38
ZNF408Q9H9D4 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
ZNF408Q9H9D4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
ZNF408Q9H9D4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.68■■□□□ 1.38
ZNF408Q9H9D4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC23.68■■□□□ 1.38
ZNF408Q9H9D4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC23.68■■□□□ 1.38
ZNF408Q9H9D4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
ZNF408Q9H9D4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
ZNF408Q9H9D4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
ZNF408Q9H9D4 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
ZNF408Q9H9D4 MESTP1-201ENST00000404287 994 ntBASIC23.68■■□□□ 1.38
ZNF408Q9H9D4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
ZNF408Q9H9D4 AC139887.4-201ENST00000607877 719 ntBASIC23.68■■□□□ 1.38
ZNF408Q9H9D4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC23.68■■□□□ 1.38
ZNF408Q9H9D4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
ZNF408Q9H9D4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC23.68■■□□□ 1.38
ZNF408Q9H9D4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
ZNF408Q9H9D4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC23.68■■□□□ 1.38
ZNF408Q9H9D4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC23.68■■□□□ 1.38
ZNF408Q9H9D4 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
ZNF408Q9H9D4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC23.67■■□□□ 1.38
ZNF408Q9H9D4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.67■■□□□ 1.38
ZNF408Q9H9D4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.67■■□□□ 1.38
ZNF408Q9H9D4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
ZNF408Q9H9D4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
ZNF408Q9H9D4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC23.67■■□□□ 1.38
ZNF408Q9H9D4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC23.67■■□□□ 1.38
ZNF408Q9H9D4 AC009947.2-201ENST00000444014 672 ntBASIC23.67■■□□□ 1.38
ZNF408Q9H9D4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC23.67■■□□□ 1.38
ZNF408Q9H9D4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC23.67■■□□□ 1.38
ZNF408Q9H9D4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC23.67■■□□□ 1.38
ZNF408Q9H9D4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
ZNF408Q9H9D4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC23.67■■□□□ 1.38
ZNF408Q9H9D4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC23.67■■□□□ 1.38
ZNF408Q9H9D4 FAM87A-204ENST00000613235 858 ntBASIC23.67■■□□□ 1.38
ZNF408Q9H9D4 AC093458.2-201ENST00000623150 629 ntBASIC23.67■■□□□ 1.38
ZNF408Q9H9D4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ZNF408Q9H9D4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
ZNF408Q9H9D4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
ZNF408Q9H9D4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC23.67■■□□□ 1.38
ZNF408Q9H9D4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ZNF408Q9H9D4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
ZNF408Q9H9D4 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
ZNF408Q9H9D4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
ZNF408Q9H9D4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC23.66■■□□□ 1.38
ZNF408Q9H9D4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
ZNF408Q9H9D4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
ZNF408Q9H9D4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ZNF408Q9H9D4 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
ZNF408Q9H9D4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
ZNF408Q9H9D4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC23.66■■□□□ 1.38
ZNF408Q9H9D4 AC097488.1-201ENST00000507834 756 ntBASIC23.66■■□□□ 1.38
ZNF408Q9H9D4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC23.66■■□□□ 1.38
ZNF408Q9H9D4 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC23.66■■□□□ 1.38
ZNF408Q9H9D4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC23.66■■□□□ 1.38
ZNF408Q9H9D4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
ZNF408Q9H9D4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC23.66■■□□□ 1.38
ZNF408Q9H9D4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
ZNF408Q9H9D4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ZNF408Q9H9D4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC23.65■■□□□ 1.38
ZNF408Q9H9D4 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
ZNF408Q9H9D4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC23.65■■□□□ 1.38
ZNF408Q9H9D4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC23.65■■□□□ 1.38
ZNF408Q9H9D4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
ZNF408Q9H9D4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
ZNF408Q9H9D4 SAPCD2P2-201ENST00000431719 1174 ntBASIC23.65■■□□□ 1.38
ZNF408Q9H9D4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
ZNF408Q9H9D4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
ZNF408Q9H9D4 AP005242.2-201ENST00000580065 1175 ntBASIC23.65■■□□□ 1.38
ZNF408Q9H9D4 AP000550.4-202ENST00000639755 178 ntBASIC23.65■■□□□ 1.38
ZNF408Q9H9D4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC23.65■■□□□ 1.38
ZNF408Q9H9D4 MYC-208ENST00000641036 567 ntBASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms