Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
CDH23Q9H251 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21.5■■□□□ 1.03
CDH23Q9H251 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.5■■□□□ 1.03
CDH23Q9H251 AL356652.1-201ENST00000615962 565 ntBASIC21.5■■□□□ 1.03
CDH23Q9H251 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDH23Q9H251 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDH23Q9H251 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.5■■□□□ 1.03
CDH23Q9H251 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.49■■□□□ 1.03
CDH23Q9H251 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.49■■□□□ 1.03
CDH23Q9H251 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDH23Q9H251 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDH23Q9H251 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDH23Q9H251 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.49■■□□□ 1.03
CDH23Q9H251 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDH23Q9H251 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.49■■□□□ 1.03
CDH23Q9H251 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
CDH23Q9H251 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.49■■□□□ 1.03
CDH23Q9H251 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDH23Q9H251 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDH23Q9H251 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC21.49■■□□□ 1.03
CDH23Q9H251 CLEC4GP1-201ENST00000596555 870 ntBASIC21.49■■□□□ 1.03
CDH23Q9H251 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.49■■□□□ 1.03
CDH23Q9H251 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.49■■□□□ 1.03
CDH23Q9H251 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.49■■□□□ 1.03
CDH23Q9H251 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDH23Q9H251 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDH23Q9H251 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.49■■□□□ 1.03
CDH23Q9H251 FAM207BP-201ENST00000447172 505 ntBASIC21.48■■□□□ 1.03
CDH23Q9H251 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.48■■□□□ 1.03
CDH23Q9H251 AC116407.4-201ENST00000623319 1061 ntBASIC21.48■■□□□ 1.03
CDH23Q9H251 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.48■■□□□ 1.03
CDH23Q9H251 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.48■■□□□ 1.03
CDH23Q9H251 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDH23Q9H251 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDH23Q9H251 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
CDH23Q9H251 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDH23Q9H251 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDH23Q9H251 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDH23Q9H251 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.48■■□□□ 1.03
CDH23Q9H251 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.48■■□□□ 1.03
CDH23Q9H251 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.48■■□□□ 1.03
CDH23Q9H251 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDH23Q9H251 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDH23Q9H251 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.48■■□□□ 1.03
CDH23Q9H251 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.48■■□□□ 1.03
CDH23Q9H251 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDH23Q9H251 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH23Q9H251 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDH23Q9H251 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.47■■□□□ 1.03
CDH23Q9H251 LINC01238-205ENST00000567549 1107 ntBASIC21.47■■□□□ 1.03
CDH23Q9H251 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.47■■□□□ 1.03
CDH23Q9H251 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDH23Q9H251 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH23Q9H251 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.47■■□□□ 1.03
CDH23Q9H251 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.47■■□□□ 1.03
CDH23Q9H251 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.47■■□□□ 1.03
CDH23Q9H251 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDH23Q9H251 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH23Q9H251 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH23Q9H251 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH23Q9H251 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH23Q9H251 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.47■■□□□ 1.03
CDH23Q9H251 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.47■■□□□ 1.03
CDH23Q9H251 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.46■■□□□ 1.03
CDH23Q9H251 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.46■■□□□ 1.03
CDH23Q9H251 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDH23Q9H251 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.46■■□□□ 1.03
CDH23Q9H251 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDH23Q9H251 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDH23Q9H251 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.46■■□□□ 1.03
CDH23Q9H251 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CDH23Q9H251 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDH23Q9H251 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
CDH23Q9H251 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.46■■□□□ 1.03
CDH23Q9H251 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDH23Q9H251 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.45■■□□□ 1.03
CDH23Q9H251 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH23Q9H251 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH23Q9H251 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.45■■□□□ 1.02
CDH23Q9H251 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH23Q9H251 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH23Q9H251 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDH23Q9H251 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDH23Q9H251 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CDH23Q9H251 AP005242.2-201ENST00000580065 1175 ntBASIC21.45■■□□□ 1.02
CDH23Q9H251 AC069148.1-201ENST00000608741 768 ntBASIC21.45■■□□□ 1.02
CDH23Q9H251 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.45■■□□□ 1.02
CDH23Q9H251 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.45■■□□□ 1.02
CDH23Q9H251 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.45■■□□□ 1.02
CDH23Q9H251 AL138966.2-201ENST00000621997 464 ntBASIC21.45■■□□□ 1.02
CDH23Q9H251 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.45■■□□□ 1.02
CDH23Q9H251 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH23Q9H251 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH23Q9H251 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
CDH23Q9H251 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.44■■□□□ 1.02
CDH23Q9H251 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.44■■□□□ 1.02
CDH23Q9H251 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.44■■□□□ 1.02
CDH23Q9H251 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDH23Q9H251 KRT8P10-201ENST00000450021 1447 ntBASIC21.44■■□□□ 1.02
CDH23Q9H251 PCED1CP-201ENST00000419887 785 ntBASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms